Chondrus crispus (carragheen): CHC_T00008124001
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Entry
CHC_T00008124001 CDS
T02916
Name
(RefSeq) hypothetical protein
KO
K02328
DNA polymerase delta subunit 2
Organism
ccp
Chondrus crispus (carragheen)
Pathway
ccp03030
DNA replication
ccp03410
Base excision repair
ccp03420
Nucleotide excision repair
ccp03430
Mismatch repair
ccp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CHC_T00008124001
03410 Base excision repair
CHC_T00008124001
03420 Nucleotide excision repair
CHC_T00008124001
03430 Mismatch repair
CHC_T00008124001
03440 Homologous recombination
CHC_T00008124001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccp03032
]
CHC_T00008124001
03400 DNA repair and recombination proteins [BR:
ccp03400
]
CHC_T00008124001
DNA replication proteins [BR:
ccp03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
CHC_T00008124001
DNA repair and recombination proteins [BR:
ccp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
CHC_T00008124001
MMR (mismatch excision repair)
DNA polymerase delta complex
CHC_T00008124001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_E_B
DNA_pol_D_N
Motif
Other DBs
NCBI-GeneID:
17319825
NCBI-ProteinID:
XP_005712116
UniProt:
R7Q512
LinkDB
All DBs
AA seq
509 aa
AA seq
DB search
MHSLEPTPPNGNGQESHPTVRVVSEIDLSPAKRFILPKKKKYEPQYAHVYFSRLKSLTAH
VLKSAKLTFGEGEEGKLQYSKRIADIASKDEMETVVVGVIFRHMKSKPSILAQYDVPSHE
LIPAPPDRATCTYPRDDDEVFIEDEYGRCALDLSQLDSAVATLSLVTGFVLALKGHEDRR
TGSFKVNAISYAGQAPQKSLPELPGDKFICITSALSFGKADGDVLAAELLMEFLRGSAGE
DPEGSTCANIVQLIVAGNSVPQLEDTESGPSAVLAAHRPLKSGEKERVAAPIVEVDRFLS
VIASSLPVAVMPGEADPVNYLLPQQPFHRCLLPSSSRNENLARVPNPFECSVDKRVILGT
SGQPVTDFALYEDQSSVMKDGKEAGKLRPSGEKVLDILTLMLQNRHLAPTCPDTLASFPF
SDGSDPFVLESTPHVFFAGNQREYASRLVRTPHVQTQASSGSSMDIDGVQGGEKTVRIVS
VPRFDETGQVVLVNLRTLDCIVREFALTM
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgcattccctggagcccacaccgccgaacgggaacggccaggaatcgcatccaacggtc
cgcgtagtgtcggagatagatctttctcctgcgaaacgcttcattctcccgaagaagaag
aaatatgaacctcagtatgcgcatgtctatttcagccgtctgaagtcgctgacagcgcat
gtcctcaaatccgctaagctcactttcggagaaggggaagaaggaaagcttcagtattcg
aagagaattgcagatatcgcgtcgaaagacgagatggagactgtcgttgttggcgtcata
ttccgtcatatgaaatcgaaacccagtatactggcacaatacgacgtcccctctcatgag
cttatacccgcgcctcccgacagggcaacctgtacctacccacgcgatgacgacgaagtc
ttcattgaagacgagtacgggagatgtgctttggatttatcgcaacttgattccgccgtt
gcgaccctctctctagtgaccggatttgtcctcgctctgaaaggacatgaggacaggcgc
accgggtctttcaaagtgaacgccatctcgtacgcaggccaggcgcctcaaaagtccctg
cccgaattgcctggagataagttcatctgcatcacatccgcactgtctttcgggaaggct
gatggtgatgttcttgcagcagagctactaatggaatttttacggggcagcgcaggtgaa
gatcctgaagggtctacatgtgccaatatcgtgcaactgatcgtggcaggaaattcagtc
ccgcagctggaagatactgagagtggcccgtcggcagtccttgccgcccatcgaccgttg
aagagtggcgagaaggaacgcgtcgcagcacctattgttgaggttgaccgctttctttct
gtaattgcctcgtcgctacccgtcgctgtcatgcccggcgaggctgatcccgtcaattac
cttcttccacagcagccgtttcaccgatgtttgctgcccagctcatctcggaatgagaac
cttgctcgcgtgccgaacccgtttgaatgctcagtagacaaaagagttattcttgggaca
tcagggcaaccggtcactgactttgcgctgtacgaagatcaatcgagcgttatgaaggac
ggtaaagaagcgggaaagttgcggccatctggtgaaaaggtgttggacattctgacgctg
atgttgcagaatcgccatctggcaccaacatgtccggacacgcttgcttcttttccgttc
tctgatggctctgatccctttgtcctggagtcaaccccgcatgtgttcttcgcaggtaac
caacgggaatacgcgtctcgattggtaagaacaccacatgtgcaaacccaggcttcatca
ggtagttctatggacattgatggcgtgcaaggtggtgagaagactgtgcggatcgtttca
gtgccacggtttgacgagacaggtcaggttgttctagtgaatctgagaacattggattgt
atagttagggagttcgcattaacaatgtaa
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