Chondrus crispus (carragheen): CHC_T00008275001
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Entry
CHC_T00008275001 CDS
T02916
Name
(RefSeq) glycosyl transferase family GT77 hemi-cellulose cell wall biosynthesis
KO
K20892
beta-arabinofuranosyltransferase [EC:2.4.2.-]
Organism
ccp
Chondrus crispus (carragheen)
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ccp01003
]
CHC_T00008275001
Glycosyltransferases [BR:
ccp01003
]
Polysaccharide
Structural polysaccharide
CHC_T00008275001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleotid_trans
EMP24_GP25L
Motif
Other DBs
NCBI-GeneID:
17317659
NCBI-ProteinID:
XP_005709933
UniProt:
R7QNF8
LinkDB
All DBs
AA seq
702 aa
AA seq
DB search
MRKDREYRRHGNLASSTSKRVSSWLFFWSGMLLVISFFQLRTPKIGSYDGGVRQLPEHAE
GEQIGDYSDRLDQYSLEIFSAPKPFVGEDKANNERAIKSWLRLKPKPKVTLLGYEAGYDE
AAREFGIGIERRVDKNFLGVPLFNSMLQRANDSKEMITVIINGDILLFDDFTQTLRKVVS
NFEHFLVVGARYDVDKLPENLDESDPQYTRKIREHVLSTGTLHTYGGMDVWAWNSNGPRL
FDPVMPHFIFGRGKYDNWLTHETISAGRRQVVDASETCLTVHIRHDYHLVTGNANQKPKR
NLLGAFWSEGKKSKFELFINIYLSLHVGSYTNQMGNVLFAPWKLSLCLEPTGMCLLKRKR
PGICNCEFSSFVGNTQTDPVVKNGSRVIRCGMISVETKDNFVIPVLPPEGSTEAPAFGLP
LTMQSVVERVIINNTIILSALNYGYRGIMMNWVCNMRHLGITNFVIAALDADLYKFAYTR
SLPTYLENTIFAGLNSSLIADASYGSDSFKQLTKMKSRVVVRLLKEGYNVVWTDSDIIYF
RNPLQDMWNYNVDLVIQTNAPDNEPMNGRRRLNSGFYLARSNGPTIQAFEDIIKFASKSR
MSEQPCFYDVMCGKEGQTAEGDNTCRYNGMVVKLLDRHLYPNGITDGIWDVPAGKIPDMF
PNLFILHNNWVKGADGKRLRFEKHGFILYDKESELCVYPETW
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaaagatcgagagtatagaaggcatggcaatttggcttcttcaacgagcaagcgg
gtatcatcgtggttgttcttctggtctggaatgcttctcgtgataagtttttttcagctc
cgaactccgaaaattggttcttacgatggaggtgtgagacaacttccggaacacgcagaa
ggcgaacagattggggattatagtgatagactggatcagtacagcctggagattttctcc
gcaccaaaaccattcgtcggtgaggacaaagctaacaacgaacgtgccatcaaatcctgg
ttgcgtctgaaaccaaaaccgaaagtaacgcttttgggatatgaggcaggatatgatgaa
gctgcccgagaatttggcataggtattgaaagaagagttgacaagaactttctgggggta
cccttgttcaattctatgcttcaaagagcgaacgactcgaaggagatgataactgtaatt
attaatggagacatccttctgttcgatgactttactcaaactctaagaaaagttgtttcg
aacttcgaacacttcttggtagtgggtgctcgatatgacgttgacaaactacccgaaaat
ttagacgaaagcgatccccagtatactcgcaagattcgagaacatgttctttcaacaggc
acgttgcatacatatggaggaatggatgtttgggcttggaattcgaacggacccaggctc
tttgaccccgtcatgccgcattttatttttggaagaggaaagtacgataactggcttacc
catgaaaccatctctgctggtcgtcgacaagttgtggatgcttctgaaacttgcttaact
gttcacattcggcacgactaccatttggtcacagggaacgcgaaccaaaagccaaaacga
aatctgcttggagctttctggtctgaaggaaaaaagtcaaaatttgagctgttcatcaac
atttatctcagcttgcacgttggttcatataccaaccaaatgggaaatgtgttgtttgcc
ccctggaaactgtctctgtgcctagagccaacaggcatgtgcttacttaaacggaagcgg
ccaggaatatgcaactgtgagttttctagttttgtcggaaacacgcagacagaccccgtt
gtcaagaatggttcgagagtaatacgatgtggtatgatttcagtcgagaccaaagataac
tttgtcattccagttcttccaccggaaggatcgacggaagcacctgcatttggtctccct
ctaaccatgcaatcagtggtagaacgtgtcatcatcaataacacaataatattgtctgct
ctcaattatggctaccgaggaataatgatgaactgggtatgcaacatgcgacatttgggg
atcacgaacttcgtcattgctgcacttgatgcggatctttacaaattcgcgtacacaaga
agtttgccaacttatctcgagaacacaatttttgctggtctgaactcatctcttatagca
gacgcgtcctacggttccgattcattcaagcagttgacgaaaatgaagtcgagggtagta
gtacgtctgttgaaggaaggatataatgtcgtgtggactgatagtgatatcatctacttc
agaaatccgttacaagatatgtggaactacaacgttgatctggtcattcaaacgaatgct
ccagataatgaacccatgaatggtagacggaggctgaattccggattctatctggctagg
agtaatggcccgaccattcaagctttcgaggatatcatcaagtttgcatccaaatcgaga
atgtctgaacagccttgcttctacgatgttatgtgcgggaaagaaggacaaacagcagaa
ggagataacacatgtaggtacaatgggatggtcgtgaagttattagaccgacatctctat
ccaaatggaattacggacggaatatgggatgtcccagctggcaaaattccagacatgttt
ccaaacttatttattcttcacaacaactgggtcaaaggggcagacgggaagcgattgcgg
tttgaaaagcatggttttattctttacgacaaggaatctgaactttgtgtatatccagaa
acttggtag
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