Chondrus crispus (carragheen): CHC_T00008285001
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Entry
CHC_T00008285001 CDS
T02916
Name
(RefSeq) Protein argonaute 1 (translation initiation factor eIF2C 1)
KO
K11593
eukaryotic translation initiation factor 2C
Organism
ccp
Chondrus crispus (carragheen)
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccp03019
]
CHC_T00008285001
03036 Chromosome and associated proteins [BR:
ccp03036
]
CHC_T00008285001
Messenger RNA biogenesis [BR:
ccp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
CHC_T00008285001
Chromosome and associated proteins [BR:
ccp03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
CHC_T00008285001
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
CHC_T00008285001
microRNA pathway
RISC loading complex
CHC_T00008285001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoN
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
17324963
NCBI-ProteinID:
XP_005717246
UniProt:
R7QFY1
LinkDB
All DBs
AA seq
864 aa
AA seq
DB search
MSTAIVRPMKRPGTGRLGTPVELDTNFFPASLPSGLVISQYAVSIYRQPKQGSSSAEMEN
VASTQPVVWNKAIFRAFLRRNQRALGRTLAYDGRSICFASKEVSRDCLAVKFPLTVDRDG
NEARQKPGETAKIEQVAVEIKHANYLKFDDVLSGRVGDSLFNQYLTAVDVVISASHMTSH
VQVGRSFYNASGAKPLGRYSVTASAWRGFYQSARLSPSGLLINLDESYTAFWNRGGEPLI
NLVRDANNGRDLNPKDPRAVRSITSTLKGLKVRAVHTGITYRVFGFSSKGAGQITFEVDG
ERKTIADYFHSAYGIRLRHPNLPCIKTQPKKETYLPMELLEVSEKQRLMGKLSEDQTRSI
VKIASTRPSNRRTAAVNTMKQLNHSNDPVCKDFGIQVKPKMIGVRARVLQTPFIRYTDKV
VKPERGAWKAPRDRCHQPGNLFSWAVINTSDLRERDLAHFLKELCTRAASAGINIPNQKP
KIVQMRRNSRVDSEMRTLKHDFDTIESLRVKGARLQLIVVIFDRRDTDMYNSVKRTGDIE
LGVPSQVLLKKNLISDRGLSMFCDNVLLKMNAKIGGGNFKALRYQDKGSVKRNHMTDPTF
INYPHIVLGADVTHPMAGDSNPSVAALVGSRDSYMGQFSGAIRNQTGRKEVITELGDMFK
EVYSRWYAGFGKRFPAAAIIMFRDGVSEGQFEEVMQIEVAAIRNACLQISSSWKPKITYI
IVTKRHHARFFPRSQSSGDRSGNIDPGTVVDTGVVSSQFYDFYLNSHAGIIGTNKPAKYT
VLVDENNTPVDALQGYIFRLAHCFQRCSRSVSMVNSAYYAHLLAFRGRAYHKDNSDSGSV
SSSHSIVPSAPKFHRYVENILFFL
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgagtaccgctatcgttagacccatgaagcgccccggcacggggcgcttgggcaccccc
gtcgagctcgacactaacttcttccctgcctcgctcccatccggcctcgtcatttctcag
tatgctgtctccatctaccgccaacccaagcaaggatcctcttccgcagagatggaaaac
gtcgcatcgacacagcccgtcgtttggaacaaggccatcttccgcgcctttctcaggcgc
aaccaaagagccctcggccgcaccctcgcctacgacggacgctccatctgttttgcctca
aaagaggtcagcagggattgccttgccgttaagttccctttgaccgtcgacagggacggc
aacgaagcccgccagaagccaggcgaaaccgccaaaatcgaacaagttgccgtcgagatc
aagcacgcaaactatctcaagttcgacgacgtcctcagcggtcgcgttggggattctcta
ttcaaccagtatctcaccgcggtcgacgttgtcattagcgcttcacatatgacctcccac
gtccaagtcggccgttcattttacaacgcaagcggcgcaaagcccctcggacgctactcc
gtcaccgccagcgcctggcgcggtttttaccagagcgcccgactctcgccatcaggcctg
ctcatcaacttggacgagtcatacacggcattttggaatcgcggcggagagccgctcatc
aacctggtccgggatgctaacaatggtagagaccttaatcctaaagaccccagggcagta
cgcagtatcacttccaccctcaagggcctcaaggtcagggctgtgcacactggaattacc
tatcgcgtgtttggattttcgtcaaagggcgctggacaaatcacgtttgaagtcgacggg
gagaggaagactatcgccgactattttcattcggcctacggcatcaggctgaggcatccg
aatctgccgtgcattaagacccaacctaagaaggagacttatctccccatggagttgctt
gaggtctcggaaaagcagcgcctcatgggcaagctctcagaggaccagacgcgcagcatc
gtcaagattgcgagcactcgcccatcgaacaggcgcactgccgccgtcaacacaatgaag
cagctcaaccatagcaacgacccggtgtgcaaggactttggcatccaggtcaagcccaaa
atgatcggtgttcgcgctagggtattgcaaactccatttatacgctatacagacaaagtt
gtcaagccagagaggggcgcttggaaggccccacgcgaccgctgccatcaaccgggaaac
ctattttcgtgggccgtgattaacacctctgacctaagggagagagaccttgcccacttt
ctcaaagagctctgcacacgagcggcctcggcaggaataaacatccccaaccagaaacct
aagatcgtgcagatgcgccgcaactcgcgcgtcgactcggagatgaggactctcaagcac
gacttcgacacgatcgagtcgctccgtgttaagggagctcgtctgcagctcatagttgtg
atctttgatcgccgagacacagatatgtataatagtgttaagcgaacgggcgacatcgag
ttgggggtaccctcacaagtgctcctgaagaagaacctcatttcggatcgcgggctttcc
atgttctgcgacaatgtcctgctgaagatgaatgctaagattggcggcggcaattttaag
gcgctccgatatcaggataagggcagcgtgaagagaaaccatatgactgatcccactttt
atcaactatcctcatatcgtgctcggtgcggatgtcacgcatcctatggccggcgattcg
aatccgagtgtcgccgccctcgtgggcagtcgtgacagctacatggggcagttttcgggc
gcaattcgcaaccaaaccgggcggaaggaagtcattacagagcttggagatatgttcaag
gaggtctactcgcgctggtatgcaggatttggaaagcgattccctgcagcggcgatcatc
atgtttcgagatggtgtgtcagaggggcaatttgaggaagtcatgcaaatagaggttgcc
gccatacgcaacgcttgcctccagatatcatcttcttggaaacctaagattacttacatc
attgtcacgaagaggcatcacgctcgctttttcccacgatcccaatcatcaggtgatcgc
tcaggaaacattgaccccggtactgtcgtcgacactggcgttgtgagcagccagttttac
gatttttaccttaactcccacgcagggattatcggcaccaacaagcccgccaaatatact
gtgcttgtcgatgaaaacaatactccggtggacgctcttcaggggtatatcttccgcctt
gctcactgtttccaacgctgcagtcgctcggtatctatggtgaacagcgcatactacgcc
catttgctcgcgttccgaggccgcgcgtatcacaaggacaattcggattctggatctgtg
tcatcatcgcattcgattgtcccttctgcgccgaagtttcatagatatgtggagaacatt
ctcttcttcctttaa
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