Chondrus crispus (carragheen): CHC_T00008288001
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Entry
CHC_T00008288001 CDS
T02916
Name
(RefSeq) Type II DNA topoisomerase VI subunit B
KO
K03167
DNA topoisomerase VI subunit B [EC:
5.6.2.2
]
Organism
ccp
Chondrus crispus (carragheen)
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccp03032
]
CHC_T00008288001
Enzymes [BR:
ccp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CHC_T00008288001
DNA replication proteins [BR:
ccp03032
]
Prokaryotic type
DNA Topoisomerases
CHC_T00008288001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topo-VIb_trans
HATPase_c_3
HATPase_c
DUF4230
Motif
Other DBs
NCBI-GeneID:
17324267
NCBI-ProteinID:
XP_005716538
UniProt:
R7QF50
LinkDB
All DBs
AA seq
742 aa
AA seq
DB search
MSNSGKRPGGKSSGPVAKRPRLVKTANPNGRGKSKTATKSTSKSQGDRDTKLKFKSPAEF
FAENKNIAGFDNPGKSLYTTIRELVENGLDAAEAIGTLPDIEIFVARIDKQQFRTMVGMD
GNRNRVDASLYKDVESVKERKAREAKEKREAKRTKSKDGSLSASGSGQLQTDNDDANDSK
ELTLESTQEASQPSQTSSKKGKSGGNDIFCVTVTDNGSGMAHDDVPNMMGRVLAGTKYCV
RQTRGKFGLGSKMALIWSKMSTGLPVRINTAKAGSEVTNCILDIDIARNIPNVIELSRKE
NPSGWRGSKVSVTIEGNWSTYRAKILLYVRQMAVITPYAQFRLTFSSGYDNADSKDFELV
FSRRTDKMPRTAAEVKHHPSSVNQLLLKQLIGDVKEDMSLVRFLTTQFVAIPRSLATRLI
TELGKGFTQHMTVGELTLNNIRQIDALLHAARFENPDGLCLSPAGEYNLRLGITKELKPS
MVATHAEPADVFEGHPFIVEAGVALGGTGMKPGLNIFRFANRIPLLFEAGNDVVTRTARD
GIRWNSYKISPNTDRIGVICSIVSTKVPFKGTGKEYIGDDSDSIKLCVKRAITQCCLQLK
TKLVRQAAQKDAAQRKMLITKYAPDVANAVVALFEELEDPDRETKDVSDSVLNGKISRDI
LLAKLQDHVQQFDKEQAIEYATAHGRDHKTLETVFIARRSEQINYSPIWLEQPRATSTPE
GSQQESAPVVRFSLLSSLQSHL
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgtccaactctgggaagcgtcctggcggaaaaagctccggtccggttgcgaagcggccg
agactagtcaaaacggcaaatccaaacggtcggggcaagtcaaaaaccgcgacaaagagc
acatcgaagagccaaggtgaccgtgatacaaaactaaaattcaaatctcctgccgagttt
ttcgcggagaacaagaatattgccggctttgacaatccaggaaagtctctctacacaaca
atccgagaactcgtcgaaaatgggctggatgccgcagaggccatcggcaccctacctgac
attgagatcttcgtggcgcgcatcgataagcagcaatttcgcaccatggtcggcatggat
gggaatcggaatagagtggatgcctctctgtataaggatgtagaaagtgtcaaggagagg
aaggccagagaagccaaagagaaaagagaagccaagagaacaaagagcaaggatgggagt
ctttccgcctcaggatcggggcagctccagacagataacgatgatgctaatgattcgaaa
gaactcactcttgaatcgactcaagaggcgtctcaaccttcccaaacttcatcgaagaag
gggaaaagtggaggaaatgacattttttgcgtcaccgtcactgataacggatctggcatg
gctcacgatgatgtgcccaacatgatgggcagggtacttgctggaactaagtattgcgtc
cgacaaacacgtgggaagtttggacttgggtcgaaaatggctctgatatggtccaaaatg
agcactggactccctgttcgtatcaacactgcgaaggcaggcagcgaagtcactaactgc
attcttgatatcgacattgcgcgcaatattccaaatgttattgagctttcacggaaagag
aacccatcaggctggagggggtccaaagtttcagtaacgattgagggtaattggtcaacc
tatagagctaagattttgttgtacgtccgccaaatggccgtcatcaccccttacgcgcaa
tttcgactcaccttttcgtctgggtacgataacgcggattcgaaagacttcgaactggtt
ttctcgcgaaggacagacaaaatgccacgtaccgctgccgaagtgaagcaccacccttcg
tctgtcaaccagttacttctcaaacagctgattggggatgtgaaagaggacatgagtcta
gtgagattcttgactacacaatttgtagcaatcccgcgctccctagccacccgtctcata
accgagctcgggaaaggttttacccagcatatgactgtcggggagctgacgttgaacaac
attcgccaaatcgatgctcttcttcacgcggcgcgattcgagaatccggatggcttgtgt
ctctccccagctggagagtacaatttacgcttggggatcacgaaagagttgaagccaagc
atggtggccacacacgcagagccagctgatgtctttgaaggtcatccattcatcgtagag
gctggggttgcccttggcggaacaggaatgaagcccgggctcaatattttccggtttgca
aacagaatcccacttttgttcgaggctggaaatgatgttgtaacgaggacggcgagggat
ggtattcgatggaacagttacaagatctcaccaaatacagatcgcattggtgtgatttgc
agcattgtgtcgacgaaagtgccgttcaaaggcaccggtaaggaatacatcggcgatgac
tcggattcaatcaaactatgcgtgaagcgagctatcacgcagtgctgtcttcaactcaaa
acaaaactcgtacgtcaggctgcacagaaggacgctgcgcagcggaaaatgttgataaca
aaatacgcgccagatgtcgcaaatgccgtcgtggcacttttcgaagagttggaggacccg
gaccgagaaacgaaggacgtgagcgacagtgtgctcaatggcaaaattagccgcgatatt
ctactagcaaagctccaagaccacgtgcaacagtttgacaaggagcaggccatagagtat
gcaacggcgcacggaagggatcacaagaccctcgaaacggtattcatagcgcggcgatcg
gagcagatcaattattctccaatatggctggagcaacccagggctacgagtacccctgag
ggcagccagcaagagagtgcacccgtagttcgcttctcactattatcgtctctacagagc
catttatga
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