Chondrus crispus (carragheen): CHC_T00008391001
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Entry
CHC_T00008391001 CDS
T02916
Name
(RefSeq) ATP-binding cassette transporter, subfamily B, member 9, group ATM protein PpABCB9
KO
K05662
ATP-binding cassette, subfamily B (MDR/TAP), member 7
Organism
ccp
Chondrus crispus (carragheen)
Pathway
ccp02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CHC_T00008391001
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccp02000
]
CHC_T00008391001
Transporters [BR:
ccp02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB6, 7 subgroups
CHC_T00008391001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_21
AAA_29
AAA_22
AAA_16
RsgA_GTPase
AAA_23
Rad17
Met_gamma_lyase
Motif
Other DBs
NCBI-GeneID:
17323340
NCBI-ProteinID:
XP_005715605
UniProt:
R7QEA3
LinkDB
All DBs
AA seq
702 aa
AA seq
DB search
MRDHFARTSLSLSRSFYFRSPISTSRIHRSNSSPYPALSPWPASFARVLSSSLTPTAHSH
SLATPNNNDTPRPRIATPSFRLIQRRHLSAVGPSGAGGPGLADGKVSRAGSIRVLRNLGG
YLWPADDATVRRRVVGAVGLLGVSKALSVSVPFMFKYAVDAMSMSASVTDVSAPILVPAA
ALIGYGAARAGSSLTGELRNAVFASVARKAIVEVAVNTFRHLHALPLSFHLQRETGALAR
VIDRGQKGIDFMLRSMVFNVFPTILEVSIVCAILATRFGPAFAGVAAATVGAYTVFTFAT
THWRTRFRKQMNRADTAASSKAIDSLLNFETVKYFGNEEHEAQKYAQFLKQYGNAHVKTQ
GSLSLLNFGQNAIFSAALTTIMLMTSHEIASGAMTIGDLVMVNGMLFQLSLPLNFLGTVY
REIQQSLIDMESMFSLLAQPAHSDLVAKNATRPLVLKNKNNGATVTFENVSFGYTDERKI
LDNVSFEVPNASTAAIVGPSGCGKSTIIRLLYGLYRPNDGRILIDGQDIWDVDMNSVRSR
VGVVPQDTVLFNNTIKYNIAYGRLGASDAEVMEAARQASIHDAVSRFPEGYETQVGERGL
KISGGEKQRLAIARTVLKDPVLLCLDETTSSLDSKTEEEILRSLHNLTRSRTAIYIAHRL
STVSGLDNIIVLDHGRVIEIGAHRSLISDNGFYADMWLRQQG
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaccattttgcgcgcacctccctttccctttcgcgatccttttacttccgctca
ccgatctcaacgtcgcgcattcaccgaagcaattccagtccgtatcccgccttgtcccct
tggcccgcatcttttgcgcgtgtcctctcctcatcactcactccaaccgctcactctcat
tcactagcaacccccaataacaatgatactccgcgccctcgcatcgcaaccccctctttt
cgcctcatccaaagacgccatctctccgccgtcggtccgtccggggctggcggccccggc
cttgcggatggaaaggtctcgcgcgccggctctatccgcgtcttacgcaacctaggtggc
tatctctggcccgccgatgatgccaccgtccgtcgccgcgtagttggcgccgtcggtctg
ctcggtgttagcaaggcgttaagcgtcagcgtcccgtttatgtttaagtacgctgtcgat
gccatgtccatgtccgcctctgtcaccgacgtctccgcacccatccttgtccccgccgcg
gccctcatcggctatggcgccgcgcgagcggggtcctcgctcacgggtgaattgcggaat
gctgtgtttgcatccgttgcgcggaaagcgatcgtcgaagtcgctgtcaacacgtttcga
catctccacgcgttgccgctttcgtttcacttgcagagggagacaggcgctttggcgagg
gttatcgatcggggtcagaagggtatcgactttatgctgaggagcatggtcttcaatgtc
tttcctaccatacttgaagtgagcatcgtgtgtgctattttggccacgagatttggacca
gcatttgcaggggtagctgctgcaactgtgggggcgtacactgtgtttacgtttgcaaca
actcattggcgaacccggttcaggaagcagatgaaccgcgcggacactgccgcgtcgtcg
aaggccattgactcgttgctcaactttgagaccgtcaaatacttcggcaatgaggaacat
gaagcccagaagtacgcccagttcttgaaacagtatggcaacgcgcatgtcaaaacacaa
ggctctcttagtttgctcaatttcgggcagaatgcaatattttcggcagcgctaactacc
atcatgcttatgactagtcacgagatcgctagcggtgccatgaccatcggagacctcgtc
atggtcaacggcatgcttttccagctttcccttcccctgaattttctgggaaccgtatac
cgcgaaattcaacaaagtttgattgacatggagtcaatgttctcactccttgcgcaacct
gctcattcagatttagttgcaaaaaacgcgacacggcccctcgtgcttaagaacaagaac
aatggtgcgactgtaacttttgaaaacgtttcctttgggtacaccgatgagagaaagatc
cttgacaatgtatcttttgaagtacccaacgccagcacagctgccattgtaggacccagc
ggatgtggtaaatccacgatcatccgccttctatatggtctgtacaggccaaacgatggg
cgaatattgatagatggacaagacatttgggatgtggacatgaatagtgttcgatcacgt
gtgggagtcgttccgcaagacacagtactctttaacaatactatcaagtataacatcgcg
tatgggcgattaggtgcatctgatgccgaagtcatggaagccgcccgccaagcctccata
cacgatgctgtatctcgttttcccgaagggtacgagacgcaagtcggagaaagaggtttg
aagatttcaggcggagaaaagcagcgtttggccatcgctcgtaccgttttgaaagaccct
gtcttgttgtgtcttgatgaaaccacaagcagcctggatagtaagacggaagaagaaatt
ttgaggtcgttgcacaatttgacaaggtcgcgaacagcaatttatattgcccatcgcctc
tcgaccgtctctggtctagacaacatcattgtgctggatcacggaagggtgattgagatc
ggggcgcacaggagcttgatctctgataatgggttctatgcagacatgtggcttagacaa
cagggataa
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