Chondrus crispus (carragheen): CHC_T00008459001 Help Entry CHC_T00008459001  CDS       T02916                                  Name (RefSeq) Vacuolar protein sorting 4b   KO K12196   vacuolar protein-sorting-associated protein 4 Organism ccp  Chondrus crispus (carragheen) Pathway ccp03250   Viral life cycle - HIV-1 ccp03272   Virion - Hepatitis viruses ccp04144   Endocytosis Brite KEGG Orthology (KO) [BR:ccp00001]  09120 Genetic Information Processing   09125 Information processing in viruses    03250 Viral life cycle - HIV-1     CHC_T00008459001    03272 Virion - Hepatitis viruses     CHC_T00008459001  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     CHC_T00008459001  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:ccp04131]     CHC_T00008459001    03400 DNA repair and recombination proteins [BR:ccp03400]     CHC_T00008459001 Membrane trafficking [BR:ccp04131]  Endosome - Lysosome transport   Endosomal sorting complexes required for transport (ESCRT)    ESCRT-III complex     CHC_T00008459001 DNA repair and recombination proteins [BR:ccp03400]  Eukaryotic type   Check point factors    Other check point factors     CHC_T00008459001 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  AAA Vps4_C MIT AAA_lid_3 AAA_14 RuvB_N AAA_16 AAA_5 AAA_22 TIP49 NPHP3_N DUF815 IstB_IS21 AAA_17 AAA_24 RNA_helicase DUF5906 AAA_33 AAA_2 nSTAND3 AAA_18 NACHT Parvo_NS1 AAA_7 Mg_chelatase bpMoxR Sigma54_activat AAA_28 AAA_25 Viral_helicase1 PhoH Cytidylate_kin Motif Other DBs NCBI-GeneID:  17323554 NCBI-ProteinID:  XP_005715842 UniProt:  R7QE58 LinkDB All DBs AA seq 448 aa AA seqDB search MGDTRTFIDQGVTHAQKAIDYDRAACKANDPEKYDNAKNSYLRAIDYYYTALKYEKNDKT KQVLRSKINSYVDRAEVMKEWLEKYDETQRNGGGGGDGSSSSGAATTSKKKEKKNEENEE DKLQNQLGGAVLTEKPNVKWDDVAGLEGAKDALKEAVILPQKFPQMFVGKRRPWKGILLY GPPGTGKSYLAKAVATEADAKFFSISSSDLVSKWQGESEKLVKELFAMARKAGKAIIFID EIDALVSSRSDNESESSRRIKTEFLVQMDGVGKSTDGVLLLGATNIPWGLDDALLRRMER RVYIPLPEEHARSGMFKIHLGNTPHNLTENDFNELGTATKGYSGADIGILVRDAIMQPVR TLQNAEFFKWIMVEEEGQGMVKRLAPCSPGDPEGQQMSLMSVSPEELHVPIVSRHDFDLA LASTKPSVGIDNVEKHIKFTSEKGQSGV NT seq 1347 nt NT seq  +upstreamnt  +downstreamnt atgggagatactcgcacgttcattgaccaaggcgtcacccacgcacagaaagcaatcgac tatgatcgcgcggcttgcaaggccaatgaccctgagaagtacgacaacgccaagaacagc tatctacgcgctatcgactactactacaccgccctgaagtatgagaagaatgacaagact aagcaggttctccgctctaagattaattcctatgtcgacagggcggaggttatgaaggaa tggctggaaaagtatgatgagacacagaggaatgggggtgggggtggagacggctcgtct agttcgggtgcagctacgactagtaagaaaaaggaaaagaaaaacgaggagaatgaagag gataagcttcaaaaccagttgggcggtgctgttctcactgaaaagccaaatgtgaagtgg gatgatgtagctggtctcgaaggtgcaaaggacgccttgaaagaggccgtcattctgccg caaaagttcccacagatgtttgtcggaaaaaggaggccgtggaaaggcattctactctac ggacctcctggtacaggcaagagttatcttgcaaaagcagttgccactgaagcagacgca aagtttttctccatttcctctagtgatcttgtctccaaatggcagggagagagtgaaaaa cttgtaaaggagcttttcgctatggctcgtaaggcgggtaaagcaatcatctttattgat gaaattgatgctcttgtgagcagtaggagtgacaatgagtcggaaagctctcgccggata aagacagaattcctcgtccagatggacggtgtagggaagtccacggatggagtcttgctg ctcggagcaacaaatattccctggggtctagatgacgctctcttacgtcgtatggaaagg cgtgtgtacattccgctccctgaagagcatgcacggtctggaatgttcaaaatccatctg ggcaatacaccccacaatttgacggagaatgactttaacgaactaggcaccgccactaag ggttattctggtgctgacatcggtatcctcgtccgcgacgctattatgcagccagttcgt actctgcaaaatgcagaatttttcaaatggatcatggtggaggaagaggggcaaggtatg gtcaagcgattggcaccctgctctccaggggatccagagggtcagcaaatgtcgctgatg tctgtctcaccagaagagcttcatgtccccatcgtgtcgagacatgactttgacttagcc ttggcaagtacaaagccatccgtaggaatagacaatgttgagaagcatatcaagttcact tcagaaaaaggccagagcggtgtctaa

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