Chondrus crispus (carragheen): CHC_T00008500001
Help
Entry
CHC_T00008500001 CDS
T02916
Name
(RefSeq) acid-thiol ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ccp
Chondrus crispus (carragheen)
Pathway
ccp00061
Fatty acid biosynthesis
ccp00071
Fatty acid degradation
ccp01100
Metabolic pathways
ccp01212
Fatty acid metabolism
ccp04146
Peroxisome
Module
ccp_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
CHC_T00008500001
00071 Fatty acid degradation
CHC_T00008500001
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
CHC_T00008500001
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ccp01004
]
CHC_T00008500001
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccp04147
]
CHC_T00008500001
Enzymes [BR:
ccp01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
CHC_T00008500001
Lipid biosynthesis proteins [BR:
ccp01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
CHC_T00008500001
Exosome [BR:
ccp04147
]
Exosomal proteins
Exosomal proteins of breast milk
CHC_T00008500001
Exosomal proteins of breast cancer cells
CHC_T00008500001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
17325733
NCBI-ProteinID:
XP_005718027
UniProt:
R7QK74
LinkDB
All DBs
AA seq
763 aa
AA seq
DB search
MTPPAFLPPAALPSRSTLLPPRLSPPHPLSAPTVRFSRRPVRSXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXSAAPSAPTRSSHVSIAPPQTIPYPVPSGPAGLSCSIIKDLSSI
PEVFAALAANPSFADRPALVDLHHPGDDSLTFSELHDRVSCFAAGLARLGLRPRDVVSFI
SENSHRWLIADLAIMTRGAAAAVRGVAAPVPELKYIYEHSRSSALFVEDTAVLDRLVAAG
LDRAKVRFVVVLFGDVDSYKDAQLPVYSYAHVLDLGFKPTSEELGCGIERPDVATALYTS
GTTGNPKGVVLTHGNILSQLEDISLGAKLDPVPGEVFVSVLPCWHVFERTAAYWVLSKGV
TLVYSNRRHFREDLAAHKPHMLISVPRVFENLHAAITAKLEAASSVRKTLFAMFFAISLA
FVKARRRVRKLDVQYNGGGGVIGKLVNMLQMTLLMPLYALANKLIWSKIRQGTGGRLRMC
LSGGGSIAGYLEDFFECAGIDICVGYGLTETAPVIANRFGEHNVRGSTGMSLPRAYVKIV
DTETGQTVPHGEQGTLFTTGPYVFSEYLRDPEATAKAFDSEGWFNTGDLAYFANEGDLVI
TGRSKDVIVLSNGENIEPAPIEGAILASPMVDQVMMVGQDEKVLGALVVPKLEYLEKEGM
IDPAYRREIEQLQEDPLANATNLRKAEVELDKNTAFRKALTSEINSRNNERISYSSNDRI
VHVRVLLVPFTVENGMMTQTLKIKKNIVEKVYSGEIAEMYHGK
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgacaccccccgccttcctcccacccgctgccctcccctctcgcagcaccctcctccca
ccacgactctctcccccccaccccctctctgcccccaccgtccgtttctcccgccgtcct
gtccgcagcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngcagcgccgcc
ccttcggcccccacccgttcctctcacgtctccatcgcccccccccaaaccattccgtat
cccgtacccagcggccctgcgggcctctcctgctccatcatcaaggatctctcttccatc
cccgaagtcttcgcagccctcgctgccaacccctccttcgccgaccgtcccgctcttgtt
gacctccaccatcccggcgatgactccctcactttttcagagctccacgaccgcgtctcc
tgctttgctgctggtctcgcccgcctcggcctgcgcccgcgcgacgtcgtctccttcatc
tcggaaaactcccaccgatggctcattgcagatctcgctatcatgaccagaggcgccgct
gccgctgttagaggcgtagccgcccccgtcccggagctgaaatacatttacgagcactcc
aggagctccgcgcttttcgttgaagacacagccgtcctggataggctcgttgctgcgggc
ctagatcgcgcaaaagtccgcttcgtcgtcgtcctgtttggtgatgtcgattcgtacaag
gatgctcagcttcccgtctactcgtatgcgcatgtcctcgacctcggcttcaagcccacc
agcgaggagttgggttgcggtatcgagcgtcccgatgttgccaccgcgctgtacacaagc
ggcaccactgggaaccccaagggtgtcgtactcacacatggtaacattctttctcaactt
gaggatattagtctcggcgccaagttagacccagttccgggcgaggtcttcgtctctgtc
cttccgtgctggcatgtttttgagcgcacagccgcttactgggtactcagcaagggcgtc
accttggtgtattccaacaggaggcactttagggaagatctggccgcgcacaaaccccac
atgcttatttctgtcccccgcgtgtttgagaatctccacgccgcgatcacagccaagctt
gaggcggcgtcctctgtgcgcaagacccttttcgccatgttctttgctatctcgctcgcg
tttgtcaaggcgcgaagacgggtgcgcaagcttgacgttcagtacaacggcggtgggggt
gtgatcgggaagcttgtcaatatgttgcaaatgactttgctcatgccgttgtacgctttg
gcgaataagctcatttggtccaagattcgacaaggcaccggtggtcgcctgcggatgtgt
ttgtccggtggaggatcgattgctgggtatcttgaggattttttcgaatgtgcgggaatt
gatatttgcgttgggtacgggcttacggagacggcgcccgtgattgcaaatcgatttggc
gagcataacgttcgtggctcgacaggtatgagcctgccgcgtgcgtacgtgaagattgtt
gatacggagactgggcagactgtaccacacggggagcagggaacgcttttcacgactggt
ccgtatgtgttttccgagtacttgagggacccagaagcgactgcaaaggcttttgactcg
gaggggtggtttaacactggtgatcttgcgtactttgcaaatgaaggagaccttgtgatc
acagggcgaagcaaggacgtcatcgtcctttcgaatggcgaaaacatagagcctgcacca
atcgagggcgctattcttgcatctccaatggtggaccaggtcatgatggtgggacaggac
gagaaggtgttgggggctctggtggtcccgaagctagagtacctggaaaaggaaggcatg
atcgatccagcttatcgaagagagattgagcagctgcaagaagacccacttgcaaatgct
accaatttgcgaaaggccgaagtcgagctcgacaaaaacacagcttttcgcaaggccctc
actagcgaaatcaactctcgaaataacgagcgcatatcttatagctcgaatgatcgcatt
gtgcatgtccgcgttcttctggtgccgtttacggtcgagaatgggatgatgactcaaacg
ctcaagatcaagaagaacattgtggaaaaagtgtactcgggtgagattgcagaaatgtac
catggcaagtaa
DBGET
integrated database retrieval system