KEGG   Chondrus crispus (carragheen): CHC_T00008500001
Entry
CHC_T00008500001  CDS       T02916                                 
Name
(RefSeq) acid-thiol ligase
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
ccp  Chondrus crispus (carragheen)
Pathway
ccp00061  Fatty acid biosynthesis
ccp00071  Fatty acid degradation
ccp01100  Metabolic pathways
ccp01212  Fatty acid metabolism
ccp04146  Peroxisome
Module
ccp_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:ccp00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    CHC_T00008500001
   00071 Fatty acid degradation
    CHC_T00008500001
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    CHC_T00008500001
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:ccp01004]
    CHC_T00008500001
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ccp04147]
    CHC_T00008500001
Enzymes [BR:ccp01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     CHC_T00008500001
Lipid biosynthesis proteins [BR:ccp01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   CHC_T00008500001
Exosome [BR:ccp04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   CHC_T00008500001
  Exosomal proteins of breast cancer cells
   CHC_T00008500001
SSDB
Motif
Pfam: AMP-binding AMP-binding_C_3 AMP-binding_C
Other DBs
NCBI-GeneID: 17325733
NCBI-ProteinID: XP_005718027
UniProt: R7QK74
LinkDB
AA seq 763 aa
MTPPAFLPPAALPSRSTLLPPRLSPPHPLSAPTVRFSRRPVRSXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXSAAPSAPTRSSHVSIAPPQTIPYPVPSGPAGLSCSIIKDLSSI
PEVFAALAANPSFADRPALVDLHHPGDDSLTFSELHDRVSCFAAGLARLGLRPRDVVSFI
SENSHRWLIADLAIMTRGAAAAVRGVAAPVPELKYIYEHSRSSALFVEDTAVLDRLVAAG
LDRAKVRFVVVLFGDVDSYKDAQLPVYSYAHVLDLGFKPTSEELGCGIERPDVATALYTS
GTTGNPKGVVLTHGNILSQLEDISLGAKLDPVPGEVFVSVLPCWHVFERTAAYWVLSKGV
TLVYSNRRHFREDLAAHKPHMLISVPRVFENLHAAITAKLEAASSVRKTLFAMFFAISLA
FVKARRRVRKLDVQYNGGGGVIGKLVNMLQMTLLMPLYALANKLIWSKIRQGTGGRLRMC
LSGGGSIAGYLEDFFECAGIDICVGYGLTETAPVIANRFGEHNVRGSTGMSLPRAYVKIV
DTETGQTVPHGEQGTLFTTGPYVFSEYLRDPEATAKAFDSEGWFNTGDLAYFANEGDLVI
TGRSKDVIVLSNGENIEPAPIEGAILASPMVDQVMMVGQDEKVLGALVVPKLEYLEKEGM
IDPAYRREIEQLQEDPLANATNLRKAEVELDKNTAFRKALTSEINSRNNERISYSSNDRI
VHVRVLLVPFTVENGMMTQTLKIKKNIVEKVYSGEIAEMYHGK
NT seq 2292 nt   +upstreamnt  +downstreamnt
atgacaccccccgccttcctcccacccgctgccctcccctctcgcagcaccctcctccca
ccacgactctctcccccccaccccctctctgcccccaccgtccgtttctcccgccgtcct
gtccgcagcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngcagcgccgcc
ccttcggcccccacccgttcctctcacgtctccatcgcccccccccaaaccattccgtat
cccgtacccagcggccctgcgggcctctcctgctccatcatcaaggatctctcttccatc
cccgaagtcttcgcagccctcgctgccaacccctccttcgccgaccgtcccgctcttgtt
gacctccaccatcccggcgatgactccctcactttttcagagctccacgaccgcgtctcc
tgctttgctgctggtctcgcccgcctcggcctgcgcccgcgcgacgtcgtctccttcatc
tcggaaaactcccaccgatggctcattgcagatctcgctatcatgaccagaggcgccgct
gccgctgttagaggcgtagccgcccccgtcccggagctgaaatacatttacgagcactcc
aggagctccgcgcttttcgttgaagacacagccgtcctggataggctcgttgctgcgggc
ctagatcgcgcaaaagtccgcttcgtcgtcgtcctgtttggtgatgtcgattcgtacaag
gatgctcagcttcccgtctactcgtatgcgcatgtcctcgacctcggcttcaagcccacc
agcgaggagttgggttgcggtatcgagcgtcccgatgttgccaccgcgctgtacacaagc
ggcaccactgggaaccccaagggtgtcgtactcacacatggtaacattctttctcaactt
gaggatattagtctcggcgccaagttagacccagttccgggcgaggtcttcgtctctgtc
cttccgtgctggcatgtttttgagcgcacagccgcttactgggtactcagcaagggcgtc
accttggtgtattccaacaggaggcactttagggaagatctggccgcgcacaaaccccac
atgcttatttctgtcccccgcgtgtttgagaatctccacgccgcgatcacagccaagctt
gaggcggcgtcctctgtgcgcaagacccttttcgccatgttctttgctatctcgctcgcg
tttgtcaaggcgcgaagacgggtgcgcaagcttgacgttcagtacaacggcggtgggggt
gtgatcgggaagcttgtcaatatgttgcaaatgactttgctcatgccgttgtacgctttg
gcgaataagctcatttggtccaagattcgacaaggcaccggtggtcgcctgcggatgtgt
ttgtccggtggaggatcgattgctgggtatcttgaggattttttcgaatgtgcgggaatt
gatatttgcgttgggtacgggcttacggagacggcgcccgtgattgcaaatcgatttggc
gagcataacgttcgtggctcgacaggtatgagcctgccgcgtgcgtacgtgaagattgtt
gatacggagactgggcagactgtaccacacggggagcagggaacgcttttcacgactggt
ccgtatgtgttttccgagtacttgagggacccagaagcgactgcaaaggcttttgactcg
gaggggtggtttaacactggtgatcttgcgtactttgcaaatgaaggagaccttgtgatc
acagggcgaagcaaggacgtcatcgtcctttcgaatggcgaaaacatagagcctgcacca
atcgagggcgctattcttgcatctccaatggtggaccaggtcatgatggtgggacaggac
gagaaggtgttgggggctctggtggtcccgaagctagagtacctggaaaaggaaggcatg
atcgatccagcttatcgaagagagattgagcagctgcaagaagacccacttgcaaatgct
accaatttgcgaaaggccgaagtcgagctcgacaaaaacacagcttttcgcaaggccctc
actagcgaaatcaactctcgaaataacgagcgcatatcttatagctcgaatgatcgcatt
gtgcatgtccgcgttcttctggtgccgtttacggtcgagaatgggatgatgactcaaacg
ctcaagatcaagaagaacattgtggaaaaagtgtactcgggtgagattgcagaaatgtac
catggcaagtaa

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