KEGG   Chondrus crispus (carragheen): CHC_T00008529001
Entry
CHC_T00008529001  CDS       T02916                                 
Name
(RefSeq) WD40-repeat containing protein
  KO
K13137  serine-threonine kinase receptor-associated protein
Organism
ccp  Chondrus crispus (carragheen)
Brite
KEGG Orthology (KO) [BR:ccp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ccp03041]
    CHC_T00008529001
Spliceosome [BR:ccp03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   SMN complex factors
    CHC_T00008529001
SSDB
Motif
Pfam: EIF3I WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WDR55 WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_SCAP Beta-prop_EIPR1 NBCH_WD40 WDR90_beta-prop_4th Beta-prop_WDR75_1st Beta-prop_IFT122_1st Beta-prop_IFT140_1st
Other DBs
NCBI-GeneID: 17323310
NCBI-ProteinID: XP_005715596
UniProt: R7QB82
LinkDB
AA seq 390 aa
MKIRSLIDSESGLHYSRWSTIAIDGPLRRQLNLQTIPSAFEFLPASFRITSLPPPRPTPS
PRPPSTLSATMSAPIRQMPLVCPGHNRGIVELQYSPPGPEGVFLMSACLDGIPMLRDGLS
GDWVGSFVGHKGAVWGACISTDASLAATAGADFTARLWDAVNGECKTTLTQKHICKSVAF
SADSSRLLTAGNTNSINIYDVNACEDTPVAFLAPADPKAKTTVKLARYVRSGSDIVVSAT
SGEREEKVLSIWDVRSGKRERTLPLGSVAKSGELTPDGKFLTVTAGDATVSVYDLEKMER
TMQVAVPVSTESASLRYPQMDMMVTGGQDLTVRKFDLKKDGTASEVEANRGHHGPVWVLR
FAPDGESYASGSDDGTIRLWKTTIDPSLVA
NT seq 1173 nt   +upstreamnt  +downstreamnt
atgaaaattagatccttgatcgattctgaaagcggtctgcattacagtcggtggagtacc
atcgccattgacggccctcttcgccgtcaacttaatttacaaaccatcccatccgcattc
gaattcctccccgcatcctttcgtatcacctcccttcctcccccccgccccaccccctct
ccccgtccaccgtccaccctgtcggccaccatgagtgctcccatccgccaaatgcccctc
gtctgccctggtcacaatcgtggtatcgtcgagctgcagtactcgccgccaggcccggag
ggcgtcttcctcatgtctgcctgtcttgacggcatcccaatgctccgcgacgggctctct
ggcgattgggtcggctcatttgtcggccacaagggagccgtatggggcgcctgcatttcc
accgacgcgtcgctcgccgccacggccggcgccgacttcaccgcgaggctgtgggacgcc
gtcaacggtgagtgcaagaccaccctcacgcagaagcacatctgcaagtccgtcgccttc
tccgccgattcctcccgcctgctcaccgcgggtaacaccaactccatcaacatctatgat
gtcaacgcatgcgaggacacccccgtcgcctttctcgccccggcggatcccaaggcgaag
actaccgtcaagctggcgcgctacgtccgctcaggcagtgacatcgtcgtctcggctacc
tctggggagcgcgaagagaaggtcctctccatctgggacgtgcgttccggcaagcgcgag
cgcaccctcccgctgggctctgtcgccaagtcgggtgagctgacgcccgacggcaagttt
cttaccgtcaccgcaggcgacgccaccgtttctgtctacgatctggaaaaaatggagcgc
accatgcaggtcgccgttcctgtgtccacggagagcgctagcttgaggtacccgcagatg
gatatgatggtcacaggggggcaggaccttaccgtgcgcaagtttgacttgaagaaggac
ggcaccgctagtgaggtcgaggcgaatcgcggccatcatgggcccgtctgggtcctcagg
tttgcgccggacggtgagagctatgctagcggaagtgatgatggcaccattcgtttgtgg
aaaactaccattgacccttctctcgtggcatag

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