Chondrus crispus (carragheen): CHC_T00008543001 Help Entry CHC_T00008543001  CDS       T02916                                  Name (RefSeq) Clathrin heavy chain   KO K04646   clathrin heavy chain Organism ccp  Chondrus crispus (carragheen) Pathway ccp04142   Lysosome ccp04144   Endocytosis ccp05100   Bacterial invasion of epithelial cells Brite KEGG Orthology (KO) [BR:ccp00001]  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     CHC_T00008543001    04142 Lysosome     CHC_T00008543001  09160 Human Diseases   09171 Infectious disease: bacterial    05100 Bacterial invasion of epithelial cells     CHC_T00008543001  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:ccp04131]     CHC_T00008543001   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:ccp04147]     CHC_T00008543001 Membrane trafficking [BR:ccp04131]  Endocytosis   Clathrin-mediated endocytosis    Clathrin     CHC_T00008543001 Exosome [BR:ccp04147]  Exosomal proteins   Proteins found in most exosomes    CHC_T00008543001 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Clathrin Clathrin_H_link DUF1717 TPR_Vps41 Motif Other DBs NCBI-GeneID:  17323833 NCBI-ProteinID:  XP_005716118 UniProt:  R7QDY7 LinkDB All DBs AA seq 1379 aa AA seqDB search MPTRRASRNGFPGAENLFNEHFFELFEEGKYREAALVAADSPGGSLRTPETIARFKAVPA DDGGRSVLLIYFQTLLERGKLNQVEAVELGMQLVAKNSVNIMEKWLKEDKLECSDQLGDL ILPSSPNLALAVYIRAKTHAKVIQVLIQIGQVAKVAPYAQKVGLEVNATELVNMASQHSP QAALELANALQQAGVGAGGQLVPAHMAVDRSGIDHAAMFDTFMNRGMLQEATAYCLDNLK SDREEHGELQTKVLEANLMNAPQVADVILQQDIWHHYDKSKVAMLCERAGLFQHALENYS DLADVKRVMQNTHVINPEFLVNYFSNLSADDRLDCIKELIGSNPRANLQLCVQVAAKHTD DIGAERLMDVFSAVKQQDALFYYLQAIVGFSEDPEVHFKFIEAACSLGQFGEAERVTRES NVFDPEKVKTYLMRTRPKDPRPLINVCDRFGFVDEMIKFMVKNRQLKFVEGYVQRVNPLQ CPATVGALLDLDQDEEFITNLIMSVKNTVPVEELVEEVEKRGKLKLLLSFLESRVGDGST DVGVHSGIAKVYVESNVNPEHFLETNPYYDSRSVGRFCEKRDPYLAFVAFKRGNCDEEVL DVTNRHSLFKDQARYLVDRCSPELYEQVLDDENENRKMIVEQIISGALPDTREPNKISGA VKAFMTANMPDKLMEMLEKLVLQTSNSTFARNTNLQNLLILTAIKADSGRVMEYVRRLDN YDGEDVAQVAIGEELFEEAFTIHQKFEQHALAIGVLLEHMKDFGRAEEYSLKVDTSEVWS ALGVKQLEAGQMSAGVNSLIKSKDPSSYMSVIEAARKGGSPGDYELVVKFLKFARNKVKD IRLVDTEILYAMCKCGRLTEVEEFISQPHGGDLEEAGDRCADDELYAAAKLLFSAVNNYG KLAPVLVRLGDFQGAVEAARKADRVRTWRAVCFACVDSKEFRLAQICGLHVVVEADELMD CIDYYQDRGHFQEIIDLLEQGLTLDRAHTSMFTELGVLLTKYRSRQMLEHCKMWWQRCNL PRLIRACEAAMLWSEMVYLHSQYNEFDNAALVMIDHSPDAWNPSGFTTVIAKAGNLEVMY KSIQFYIDEQPELLNDLLSVLAPKVESSRVISILRRAYADRFGDLGLLPLCKGYLLKVQE SNVPDVNDALNDILIAEGSLDELETSIDSYDNFDQFVLARRLEKHELIQLRRISATLFRR NGKYEQAIEVSKRDKLYKDAVESVAASEDAELTEELATFFLENQLLECFTTILYTCFEFF RPDMALELSWRYNVMDHAMPFMIQTMKEIGQRLMGLEEESKEKREIDEDEKKKIDDEVND DPSVLLFGLNPSQAADAGVPMLMAPPGGGAGMGGRTVPQIGWTQSAAAALQPTFAGLQQ NT seq 4140 nt NT seq  +upstreamnt  +downstreamnt atgccaactcgccgtgcgtcgcgcaatggttttccgggagcggagaaccttttcaatgag cacttctttgagcttttcgaagagggcaagtatcgcgaggcggcattggtcgctgctgat tctccagggggttcattgcgaactccggagactattgctcgattcaaagctgtgcccgca gatgacggtggtcgatcagtgttgctgatttacttccagacattgctggaacgagggaag ctaaatcaggtcgaagctgttgaattgggtatgcagcttgttgccaagaattccgtcaat attatggaaaaatggctcaaggaggacaagctcgaatgctcggatcaactaggggatctc attctcccgagtagtccgaacttagcactcgccgtctacattcgtgccaagacacatgca aaggttattcaagttctcattcaaattggacaagttgctaaggtggcgccgtatgctcaa aaggtaggcttagaagtcaacgccaccgagcttgtgaacatggcaagccagcattcacct caggcagcattggaactagcaaatgcattgcaacaagccggcgtaggtgcaggaggacag ctcgtgcctgcacacatggccgtagatcgaagtggcattgaccacgccgctatgtttgat acattcatgaatagaggaatgttgcaagaagcaacagcgtactgcttagataatttgaaa tcagatcgggaagaacatggggaactccaaactaaggtgctcgaagcaaaccttatgaat gcgccccaggttgccgatgtaatattgcagcaagatatttggcaccactacgacaaatcg aaggtcgcgatgttgtgtgaacgtgcaggtcttttccagcatgcacttgaaaattattca gacctggcggacgttaagcgtgttatgcaaaatacacatgttattaaccccgaattcctc gtgaactacttctccaacctatcggcagacgatcgattggattgcattaaggaactcatt ggttcaaacccaagagcaaatcttcaactttgcgtgcaggttgccgcgaagcacacagat gacataggagctgagcgtttaatggacgttttttcagccgttaagcaacaagatgcccta ttttactacttgcaggctatcgtcggattttctgaggaccctgaggtacacttcaagttt attgaagctgcatgctccctgggacagtttggggaagcggagagggtcactcgggaatcc aacgtttttgatccagagaaagttaagacttacttgatgcggacaaggccgaaagatcca cgccctttgatcaacgtctgcgatcgatttggattcgtagatgaaatgatcaagttcatg gtgaagaaccgacagttgaagttcgtagaggggtacgtccagcgtgtaaatccgcttcag tgtcccgcaactgtaggagccttgcttgacttggatcaggacgaagaattcatcacaaac cttatcatgtctgttaagaacactgttccggtggaggaactagtcgaggaggttgagaag agaggaaagctgaagcttctgctgtcatttctagagtcaagagttggtgacgggtccaca gatgtgggggttcattctggaatcgctaaagtttacgtcgagagcaacgttaacccagag catttcctggagaccaatccttattacgactctcgcagcgttggtcgcttctgcgaaaag agagacccatatctggcttttgttgcattcaagcgtggcaactgcgatgaagaagtcctt gatgtcacaaatcgtcactctctcttcaaggaccaggcgagatatttagttgaccgctgc agtcccgagttgtatgagcaggtgcttgacgacgagaatgagaacaggaagatgatcgta gagcaaattatctctggcgccctccccgatactcgggagccgaacaaaatttcaggggct gtgaaggccttcatgacggcgaatatgccagacaaactgatggaaatgttagagaaactt gtccttcaaacctcaaactctacttttgctagaaacacgaacctgcagaatctgcttatt ctgactgcaatcaaagccgactcaggacgcgtcatggagtatgtcaggcgcttggataac tacgacggagaggatgtagcccaggtggcgattggggaagagctcttcgaagaggcgttt acaatccaccagaagtttgagcaacatgcattagctataggtgtgttgctggaacacatg aaggattttggccgagccgaggaatactcattgaaggttgatacaagcgaagtctggtct gctctcggtgtgaagcagcttgaggctggacagatgtcggctggtgtcaactctttaatc aagtctaaagatccgtcatcttacatgtctgtgattgaagctgctcgcaaaggcggaagt ccgggggattatgagttggtggttaagttcctgaagtttgcccgcaacaaggtcaaagac attcgccttgtcgatacggagattctgtacgccatgtgcaagtgcggcagattgaccgag gttgaagaatttatatctcaaccgcatggtggcgatcttgaggaagcaggagaccgatgc gcagacgatgagctctacgcggcagcaaagcttcttttctctgccgttaacaactacgga aagcttgcgcctgtccttgtccgccttggcgacttccagggagctgttgaggcggcgaga aaggcagatcgcgttcgcacttggagggcagtctgctttgcatgcgtggattcgaaggag tttcgccttgcgcagatttgcgggttacacgttgttgttgaggcagacgagttaatggat tgtattgattactaccaggatcgtgggcattttcaggagatcatcgacctgctcgaacag gggcttaccttggacagagcacacacctcgatgttcacagaactcggtgtcctgcttacg aaataccgaagcaggcaaatgctagagcattgcaagatgtggtggcagcgatgtaacctt ccaagacttattcgagcatgtgaagcagcgatgctgtggagcgaaatggtgtacttgcat tctcaatataacgaatttgacaacgcggctttggttatgattgatcactccccggacgca tggaatccctccggatttacaacagttattgcgaaggctggtaatctggaagtcatgtac aaatcaatacagttctatattgacgaacaaccagaactcttgaatgacttgttatctgtt cttgctccgaaagtggagtcttcgcgcgtaatttcaattcttcgacgagcctatgcagat cgtttcggagacttgggcttgctccctctatgcaaagggtacctgctaaaggtgcaagag tcgaatgtcccagacgtgaacgatgccttgaatgatattctcattgctgagggttccctg gacgaacttgagacaagcattgattcttacgacaatttcgatcaattcgtacttgcgcgg cgcttggagaagcatgaactcattcaactgcgtcgaatttctgccacattatttaggcgc aacggcaaatacgaacaggcaattgaggtttccaagagagacaaattgtacaaggatgcc gtggagtctgttgcggcatctgaggacgccgaactgactgaagaattagcaactttcttt ttggaaaaccagcttctggagtgtttcaccactattctgtatacctgcttcgagttcttc agaccagatatggcactggaactgtcgtggcgatataacgtgatggaccacgcgatgcct ttcatgattcaaacaatgaaagaaattggtcagagattaatgggccttgaggaagagagc aaggagaaacgagaaattgacgaagacgagaaaaagaagattgacgatgaagtcaatgac gatccctcagtactgctctttggtcttaaccccagccaagccgccgatgctggtgtaccc atgctgatggcgccgccgggaggtggtgctgggatgggggggcgtacagttccgcaaatc ggctggacgcagtccgcggctgcagcacttcaaccaacttttgcaggtttgcagcagtaa

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