Chondrus crispus (carragheen): CHC_T00008567001
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Entry
CHC_T00008567001 CDS
T02916
Name
(RefSeq) RuvB-like DNA/RNA helicase pontin
KO
K04499
RuvB-like protein 1 [EC:
5.6.2.4
]
Organism
ccp
Chondrus crispus (carragheen)
Pathway
ccp03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
CHC_T00008567001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccp03036
]
CHC_T00008567001
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ccp03037
]
CHC_T00008567001
Enzymes [BR:
ccp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CHC_T00008567001
Chromosome and associated proteins [BR:
ccp03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
CHC_T00008567001
Chromatin remodeling factors
SRCAP complex
CHC_T00008567001
INO80 complex
CHC_T00008567001
INO80 complex (yeast)
CHC_T00008567001
SWR1 complex
CHC_T00008567001
ASTRA complex
CHC_T00008567001
Cilium and associated proteins [BR:
ccp03037
]
Motile cilia and associated proteins
Dynein assembly factors
CHC_T00008567001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TIP49
TIP49_C
AAA
AAA_22
RuvB_N
AAA_16
Cdc6_lid
TsaE
AAA_28
TFIID-31kDa
DBI_PRT
AAA_18
AAA_19
SLFN-g3_helicase
DUF212
nSTAND3
CoaE
AAA_29
NACHT
Zeta_toxin
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
17318504
NCBI-ProteinID:
XP_005710785
UniProt:
R7QSM6
LinkDB
All DBs
AA seq
456 aa
AA seq
DB search
MKIEDVRSTAKAQRIAAHSHVKGLGLSANGTAAQMGGGLVGHEQAREAAGVVVELIKCKK
MAGRALLITGGMGSGKTALALAIAQELGTKVPFCPMVGSEVYSSEVKKTEVLMEHFRRAI
GLRIKENKEVFEGEVIELTPEETENPLGGYGKTISKVVIGLKTVRGTKQLKLDPTIYESL
QKERVSVGDVIYIEANSGAVKRVGRSDVYATEFDLEAEEYVPLPKGDVHKKKEVVQDVTL
HDLDVANARPQGGRDIMSMLNQMGKPTKTEITEKLRAEINKIVSGYIDQGVAELVPGVLF
IDEVHLLDIECFAYLNRALESNLAPIVIFATNRGMTEVRGTDMRAPHGIPVDLLDRCMVI
RTGPYTMEEIAVIIQIRAKVEGVVLKDNSVVTALADVAARTSLRYATQLLTPASILSGVK
GQDHLTAEDVKEADSLFYDAKASARLLMESPSKYIS
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcgaggatgtccgatcgacagcgaaagcacaaagaattgcggcgcattctcac
gtgaagggtcttgggctcagcgcaaatggaaccgcggctcaaatgggtggcggccttgtt
ggccatgagcaagcacgggaagcggctggcgtggtagttgagctcatcaagtgtaagaaa
atggcaggccgcgcactcctcatcacgggaggaatgggatctggaaagactgcccttgct
ctggcaattgcgcaagaattgggtaccaaagtaccgttctgtcctatggtcggctctgaa
gtgtattctagcgaggtgaagaaaacagaggtcctcatggagcattttcggagggcaatt
gggctgaggatcaaggagaataaggaagtgtttgagggggaggtcatcgagctcacccca
gaggagacggaaaatcctcttggaggttacgggaaaacaataagtaaggtcgtcatcggc
ttaaaaacagttcgcgggacaaaacaactcaagcttgaccctacaatttacgagtccctt
caaaaagaacgcgtttccgtgggggatgttatttatatcgaggcaaattccggggcagtg
aagcgggtgggaaggagtgacgtttatgcaacagagtttgatcttgaagcagaagaatac
gtgccactaccgaaaggagatgtgcacaagaagaaggaagtcgtccaagacgtaacgctg
catgatctcgatgtcgcaaacgcaagaccacaaggcggtagagacattatgagcatgttg
aaccagatgggcaagccgacgaaaacagaaatcactgaaaagctacgggcggaaatcaac
aaaatcgtttctggctacatagatcaaggggttgccgagcttgtgcctggagttttattc
attgatgaagtgcatctcttggacattgaatgcttcgcgtacttgaatcgcgcgctagag
tccaacctcgcaccgatcgttattttcgcaacgaacagaggaatgactgaggtccgcgga
acagatatgcgtgcaccacatggaattcctgtcgatctgttagaccgttgtatggtcatt
cgaaccgggccatatacgatggaagagatcgctgtcatcattcaaattcgagccaaggtt
gaaggcgttgtcctaaaagacaactccgtggtcacagctcttgcagatgtggctgcacga
acaagtctgcgatacgcaacgcagctactaacaccagcaagtattctgtcaggtgtaaaa
ggacaagaccatttgacagctgaagatgtaaaagaagcagacagtctcttttacgacgca
aaggcttctgccagattgctaatggaaagtccttcaaagtacataagctaa
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