Chondrus crispus (carragheen): CHC_T00008573001
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Entry
CHC_T00008573001 CDS
T02916
Name
(RefSeq) DNA mismatch repair protein MutS homolog, MSH4
KO
K08740
DNA mismatch repair protein MSH4
Organism
ccp
Chondrus crispus (carragheen)
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccp03036
]
CHC_T00008573001
Chromosome and associated proteins [BR:
ccp03036
]
Eukaryotic type
Meiosis-specific proteins
Others
CHC_T00008573001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_IV
AAA_27
AAA_29
Motif
Other DBs
NCBI-GeneID:
17318523
NCBI-ProteinID:
XP_005710810
UniProt:
R7QSP3
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All DBs
AA seq
479 aa
AA seq
DB search
MDDLAEQTRTKYNIPKLQLSMHLKRGFHFSIHKKFLDVKDFPDEFIQIDAGTKIHRFSSN
ELVQLNSRYHDSLQEIWRITEIELGSLLNEIFKVEAITALHRLCDSIAILDTMASFVSYS
SYCQASTERPKLTIGGPIAMQNAFHPVLLDMKPRVAIPNDVFLDETSALHLISGRNQAGK
STFIRMVGLITVMAHTGCMVPAKFASIRILKRIATRFNTSDDPSQSQSNYSKEMHDIATI
LEAIRQQEDSTFLENCGDKQTTPSPNLPSILILVDELGRSTSTLDGFAISYAVAEYLSSC
PNVLTLFTTHFLGLGAMANINPVIKAFHLETVPLFENQMTSIGTGLAGRKFTFTVRSGTL
TETSYGIDTARLAGFPNQVATQAHELLAGMPVRSIANANDFAKANLAFGQREKRQLQKTI
SLVSVAQRISLLQSSARDPTQARSLLLELQRKLRISQRTTKSNRSQSSGSLVAGATEVE
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggacgatttggctgaacaaactaggacgaagtataatataccgaagctacaactctcc
atgcacttgaagaggggctttcacttttcaatccacaagaagttcctcgatgtgaaagat
tttcctgatgagttcattcaaatcgatgctggaacgaaaatacaccggttctcctcaaat
gagttggtgcaactgaactcaaggtatcacgattctctacaagaaatatggaggataaca
gagattgagcttggttccctcttgaatgaaatatttaaagttgaggcaatcacagcgcta
catcgcctctgtgacagcattgccatccttgacaccatggcctcattcgtgagctattct
tcttactgccaggcaagcactgaacgtccaaaattgactatcggtggtccgattgcgatg
caaaacgcctttcacccagttctgcttgatatgaagccacgcgtcgccattcccaatgat
gtcttcctcgatgaaacgtctgctcttcacttgatatctggaaggaatcaagctgggaag
tcgactttcatacgcatggtcggtctcattaccgtcatggcccacaccggatgcatggtt
ccagccaaatttgcttcgatccgaattttgaaaagaatagcaacgaggttcaacaccagc
gacgacccatcccaatctcaatcgaattattcgaaggaaatgcatgacatcgctacaatt
ctggaagcgattcgtcagcaagaagatagcacgtttcttgaaaactgcggagacaagcaa
accactccatccccaaatttgccgagcatcttgattcttgttgacgaactaggacgatcg
acatccacactggatggttttgccatttcatatgctgttgcggaatatttgtcatcatgt
ccaaatgttctgaccttgttcacaacgcatttcttgggactaggagcaatggcaaatatc
aatccggtcatcaaagcatttcatcttgagacagtccctttgtttgagaaccaaatgaca
tcaatagggacaggacttgctggtagaaagtttacattcaccgttcgaagtggtacttta
actgaaactagttatggtattgataccgctagactagcgggcttcccgaatcaggttgcg
acacaggcacacgaactgcttgcgggaatgccagtgcgcagtattgccaatgcgaatgat
ttcgcaaaggcaaaccttgcctttggccagcgtgagaaacggcaattgcaaaagacaata
tcactggtctcggtcgctcagagaatatctctactacaaagctcggcaagagaccccacc
caagctcgtagtctgttactggagcttcagagaaaacttagaatttcacagaggaccacg
aagagcaatcgaagtcaatcctctggctcactggtggcaggcgcaacagaggtcgagtag
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