Chondrus crispus (carragheen): CHC_T00008579001
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Entry
CHC_T00008579001 CDS
T02916
Name
(RefSeq) DNA topoisomerase
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ccp
Chondrus crispus (carragheen)
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccp03032
]
CHC_T00008579001
Enzymes [BR:
ccp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CHC_T00008579001
DNA replication proteins [BR:
ccp03032
]
Eukaryotic type
DNA Topoisomerases
CHC_T00008579001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
Motif
Other DBs
NCBI-GeneID:
17321279
NCBI-ProteinID:
XP_005713564
UniProt:
R7Q8D5
LinkDB
All DBs
AA seq
720 aa
AA seq
DB search
MTTATKRARPIPAIESSDEDDELPLINRRVSKKPRVSLSSASASNSTSAQTKSRLKQRSS
SDRVLADARRQRRQNGTTTVVRPNPAAAKGRRAKKEEAKLEPIPVEEKKPKREGQSSSSD
QGKDNGGYRWWDEGEGERNSGIKWTTLLHNAVIFPPEYEPHGIPLLYNGKAVELSAESEE
IATFYAAKLATDYVQKPTFQRNFFDDFRHSLRSTSAHRIIKKLELCDFSRIHAHLEKKKQ
EKKDIPAAEKKKLREEEAVRCKKYTVALVDGREEKVGNFRVEPPGLFLGRGEHPKMGKVK
SRIYPEDITINVGHDAEIPPCPLEGHKWGKIIHKRDVTWLCFWKDTITGGSKYVWLAAGS
AFKGMSDHAKFEKARRLSQYIEQIRRDYRQGWKAKGKEPKQRATAMYLIDKLALRVGNEK
GEDEADTVGCCSLRVEHIKFVPPRTIELDFLGKDSIRYFNSVQVEKEVYENLKLFCRNKK
PGEDIFHRLTVTGLNDYLKSLMDGLSAKVFRTYNASVTLDNLISNTPARSDLLEKIVFYN
QQNKEVAILCNHQRALPKAHGSQMEKMDKKVVDTQQWLTELKRGRNKINKSKGSIDSVDL
IQWMPEKPVFTEDMDDKERAAERKRAAAAPRVKTARVKKLPQIETAIKSVSERLAKLKAD
MQVKEDMKTVALGTSKINYLDPRITVAWCKKREVPIERIFAKTLLVKFAWAMETSEDFRF
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgactaccgccactaagcgagcacgccccatcccagctattgagtcctcggatgaggat
gatgaacttcctttaattaatcgtcgcgtgtcgaagaagccacgtgtttcactaagttct
gcaagcgcgtcgaattctactagtgcacaaacgaagtctcgtttgaagcaacgctcctct
tctgatcgtgtcctcgctgatgccaggagacaacgtcgtcaaaacggcaccactaccgtt
gttcgcccaaatcctgctgccgccaaagggagacgggcgaagaaagaagaggccaaacta
gaaccaattccagtcgaagaaaaaaaaccaaagcgggaaggtcaatcctccagcagcgat
caaggaaaagataatggtgggtatcgatggtgggatgaaggtgagggagaaagaaattct
ggtatcaagtggactaccctgttacacaatgctgttatttttcctccagaatatgaaccg
catgggataccgcttctctataacggtaaagctgttgagctttctgcagaatcagaagag
attgccactttttatgctgcaaagctcgcaactgactacgtgcagaaacctacgtttcag
cgaaacttcttcgacgacttccgccattctctacgttcgaccagtgcgcatcgtatcatt
aagaagcttgaactctgtgacttctctcgtatccatgcccatctagagaaaaagaagcag
gagaagaaagacattccagccgcagaaaaaaagaagcttcgcgaggaggaagcggtgcgg
tgcaaaaaatataccgtagcattggtcgatgggcgggaggagaaagtcggcaactttcgt
gttgaacctccaggcctctttttgggacgtggggagcatcccaaaatgggcaaagtcaag
tctcgtatatatcctgaagatatcacgatcaatgtaggccatgatgcagaaattcctccc
tgtcccttggaagggcataagtgggggaagattatccacaaaagagatgtgacttggctt
tgcttctggaaggatacgatcaccggtggttccaagtatgtatggcttgccgcgggatcc
gcattcaagggtatgtcagaccatgccaagttcgaaaaggcccgtcgtctctctcagtac
atcgaacagattcggcgagactaccgacaaggctggaaggcaaaggggaaggaacccaaa
cagcgagccacagccatgtatctcatcgataagcttgcgcttcgagtgggaaacgagaag
ggagaggatgaagcagacacagtaggttgctgctcactacgcgttgaacacatcaagttt
gtgccaccgaggaccatagagctggactttttgggcaaggacagcatccgttacttcaat
tccgttcaggttgaaaaggaagtctacgagaacctgaaattattttgtcgaaacaaaaaa
cccggggaagatatctttcatcgtctcacagtgaccggtctcaatgattatctgaaatca
cttatggatggcctaagtgccaaggttttccgtacttacaacgcgtcggttacgttagac
aatctcatttcgaatacacccgctcgctcagatcttctcgagaagattgtgttctacaat
caacaaaacaaggaagtcgccattttgtgtaatcatcagagagctcttcccaaggcgcat
gggtctcaaatggagaaaatggacaaaaaagttgtcgatacccagcagtggttgaccgag
ttgaaacgtggccggaataaaatcaacaagtcgaaagggtcgattgattcggttgatctc
atccaatggatgcctgaaaagccggtatttacggaagacatggatgataaggagcgcgct
gccgaacgaaaacgtgcagccgccgccccgagggtgaaaaccgcgcgcgtgaaaaaactc
cctcagattgagacagcaattaaatctgtttcggaaagacttgcaaagttgaaagcagac
atgcaagtgaaggaggatatgaagaccgtggcacttgggacttccaagattaactatctt
gacccccggatcactgtcgcctggtgtaagaagcgcgaagtgcctatcgagcggatcttt
gctaagactcttttagtgaagtttgcctgggccatggaaacgtctgaggacttccgtttc
tga
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