Chondrus crispus (carragheen): CHC_T00008675001
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Entry
CHC_T00008675001 CDS
T02916
Name
(RefSeq) Translation initiation factor eIF4, subunit G
KO
K03260
translation initiation factor 4G
Organism
ccp
Chondrus crispus (carragheen)
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccp03019
]
CHC_T00008675001
03012 Translation factors [BR:
ccp03012
]
CHC_T00008675001
Messenger RNA biogenesis [BR:
ccp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
CHC_T00008675001
mRNA cycle factors
Stress granule specific factors
CHC_T00008675001
Translation factors [BR:
ccp03012
]
Eukaryotic type
Initiation factors
eIF-4
CHC_T00008675001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
W2
MA3
Ins_P5_2-kin
ARM_LIN_2nd
Motif
Other DBs
NCBI-GeneID:
17326052
NCBI-ProteinID:
XP_005718342
UniProt:
R7QK53
LinkDB
All DBs
AA seq
1490 aa
AA seq
DB search
MPTDPPTVNPSNAAPHGKAVPPPAHPSQQPHHRSLPQQQQRHLRFPQQHHSLLQPPNPIP
LSHHTQPQHIPRQYAALSSARNISPMQQQGLSQPPHQIPPQQPQQQQARQHPRPNLNPHQ
QPPQQPYYVNGGYPGLSAYPPQVAAQYGLSPNYVFTPQAPYYNGMQPQGPPQQPGPHNPR
SQRPYSRNIPPQAASHQPQSRVTLPPPKKQILAIVDPDTNEEVKVDSVDKKQPVRTPPVP
VSKTAVKIPPRTSRPLELVTDPADAIPKQGAADKVPNTAPLQVLTKQSTSDKSKDLVSEN
KQDPIASAEAASPVESSEKTPSTKSGTSVSTARESTSDKPAQLNSSIPVKSIVSTSSTDV
KSPNDRGVSRPVVASVSTPSNMPEPTKEVEKKSPPGPAAEISTKSSPSAASGASKQISSP
TVVASEPVKPVDSVSRLGVSELQSATSAENETAAARSTGPPPQHPASPPGAQGVENQEDA
SVEADKDSESETTAGLPSYIFGEGERRVYPPGFTHALQEMVTPERDAFYRNILSNRNILK
GGAPPAGGDSYGRGGQQRRGNSASSNEGRWARNPQPQKSTTSRFSVSRGAPAPVVGSGVG
SYDPFDLRSARSQNPPPAPKAQPTQGRGNQDPRGSHMRMDGPTRGGHGPIDPFVPVAPPV
EKLKRSENGWKRNKESDDVVTSKVKQIRSLLNKLTLEKFDKIFKQIIDINISSYEILTGV
VREVFEKALFEPKFSGMYAELCVRLDLATREMLQQASIVDDRGRPIFFRNILLNNCRDEF
IRFAKSSESTEKDKQTEEDDPAKEDKTDSATEEASVEEAKKPLTPKEKAAKEKAAAGKAA
ANATTAKRRMLANVRFIGELFLKDLLREQIIHKQCIQRLLKIGIESREEDVLEALCKLLS
KTGAKLSQNKDAIQHIDNYFKPLQTMSRDHTLPARVRFMLQDLLEQRQNNWKVRREEVGA
KTISEIHKDIEKEERAKAEAQAAARERRGRGGGMHSRHRGPPPFSHVTMTMADMKKSGGS
VSRSAAILEKHGGMPSSRKLSTMNAASLRPGGSRPSYGAFGPLGESRDGSSGMRSGDARR
NMSNDKRVASSRRPAPVKPAAPVEQKPKIMEPEVLKRKARSIALEYWSIGLIKEAQECIV
EEVKPVNYAKFLREIIKFSLSAKVQDRLKSISLLVGLLGDTISETLFISAFSDVVAELSD
IEMDDPRASEFLAKYVAAIACSGKLSAQKSDVFGLDFLKKALPSIGDAKRESKFVICIFA
DIYEHLSKTIADEEQNKNAIRNALTALDVDLSARMYSWNAQIGMKSLDSMLKDAGISFVV
PLLPMQLRLKETLETSPSASALEKVFNSSEQPKDDLRSPSFMKMVIRTSFDWLFMKPPSS
VKDVFGEVVGKPLVQSFNGEIPRDVQMAALLETQSFIVRNLDILPAHKEGDYDKPGSIVF
DSLYFADVVEEDTFLGWREDTDESTRVEGKDKMIMQTSAFFRWLETAEEE
NT seq
4473 nt
NT seq
+upstream
nt +downstream
nt
atgcccaccgaccctcccaccgtgaacccttctaacgctgcgccccacggcaaagcagtc
ccaccccctgctcacccttcccagcaaccccaccacaggtctctcccgcagcagcagcag
cgtcatctgcgcttccctcaacagcaccattccctgctgcagcctcctaatcccattccc
ttgtctcaccatacccaaccgcaacatatccctcgtcagtatgctgccttgagctcggct
cgaaacatctcaccaatgcaacagcaaggtctttctcaacctcctcaccaaatcccccca
caacaacctcaacagcaacaagcccgtcagcatcctcgccctaatttgaatccccaccag
caaccacctcagcaaccctactatgtcaacggcggttatccgggtctcagtgcttacccc
ccgcaagtcgccgcccagtacgggctaagcccaaactatgtcttcactccgcaagcaccg
tactacaatggcatgcaaccgcagggcccacctcaacaaccgggacctcataacccgagg
tcccagaggccctactcccgcaatatacctccgcaagccgcatctcaccaaccccagtcg
cgagttacattgcctccgccgaagaagcaaatcctcgccatcgtcgatccggatacaaat
gaagaggtcaaggttgacagcgtggacaaaaagcagcctgttcgcactcccccggtcccc
gtctccaagaccgccgtgaaaattcccccgcgcacctctcgtccgctcgagctcgtaact
gaccctgccgacgcaatcccgaagcagggtgcggcagacaaggtaccgaatactgccccg
ttacaagtcctcaccaaacagagtacatcagacaaatcgaaggacctcgtatcggagaat
aagcaggatcctattgcaagtgccgaggcagcttccccggtcgagtcatcggagaagaca
ccatcgaccaagtctggcacttccgtcagcacagcgcgcgaaagcacttctgacaagccc
gcgcagctgaattcttcgataccagtgaagtcgattgtgtctacatccagtactgacgta
aagagccctaatgaccggggcgtctcgagacctgtcgtggcaagtgtctctacgccttct
aatatgcctgagccgacaaaagaggtggagaagaagtctccgcccggtcccgctgcagaa
atctcgacgaagtcatccccctctgccgcgtcgggtgcctcaaagcagatatcaagtccc
acggttgtagcatcagagccagtgaagcccgtagattcggtttcgcgtttaggcgtttcc
gagttacaatccgctacttctgcggaaaacgaaaccgctgcagctcgaagtacaggacca
ccaccgcagcatccggcgagcccgcctggagcccaaggtgtagaaaaccaggaggatgct
tccgtggaagccgacaaggattccgaatctgagacaacggcaggtctcccgagctatatt
ttcggagaaggagagcgccgcgtctaccctcccggttttactcatgcacttcaagaaatg
gtcacccccgagagagacgcattttacaggaatattttgtccaacagaaatattctgaaa
ggcggtgcgcccccagctggcggtgatagttacggacgaggaggtcagcaacgaagagga
aactcggcttcatcgaatgagggtcgctgggccagaaatccccagccacagaaatctacc
acttcacgattctcggtatcaagaggggctccagctccggtcgtcggcagcggcgttggt
tcatacgacccttttgacctccgctccgctcgctcgcagaatcccccgcctgccccgaag
gcacagccaactcaagggcgcggcaatcaggatccgcgcggttcccatatgcgaatggat
ggtccaacacgcgggggccatggtccaattgatccgtttgtaccagttgcaccacctgtt
gagaagcttaaaaggtcggagaatggatggaagcgcaataaggagtctgatgacgtcgtc
acttccaaggtcaagcaaatacgttctttgctcaataagctcacacttgagaaatttgac
aagattttcaaacagattattgatatcaacatctcaagctatgaaattttgaccggtgtc
gtgagggaggttttcgaaaaagccctttttgagcctaagttttcagggatgtatgccgag
ttgtgcgttcgccttgacctcgcaacaagggagatgcttcaacaggctagtatcgtagac
gatagaggcaggcctatcttcttcagaaacatcttgctgaacaactgtcgagacgaattt
atcaggtttgcgaaatccagcgaatctacagagaaggacaaacaaactgaggaggacgac
cctgcgaaagaagataaaacagattcagcaacagaagaagcttctgtcgaggaagcgaaa
aagcctcttacaccgaaggaaaaagccgcaaaggagaaagccgcagccggtaaggccgcc
gccaatgccactacggcaaaacgaagaatgcttgctaacgtgcgattcattggggagtta
ttcctgaaagatctcttgagagaacaaattatccacaaacaatgtattcagcgtctcttg
aagattgggattgagagcagagaggaggatgtcctcgaagcgttatgtaagctgttaagc
aagactggcgcgaagctttcgcagaacaaggacgcgattcagcatatcgacaactacttc
aagccattacagactatgtcgagggaccacactctaccggcacgcgtacgtttcatgctt
caagacttgctcgaacagagacagaacaactggaaggtaaggagggaagaagtcggcgcg
aagactatctcggagattcacaaagacatcgaaaaggaagaacgagccaaagcagaggca
caagctgcggctcgtgaaagaagaggtcggggtggtggtatgcattctcgtcatagaggc
ccaccgcccttttcgcacgtgacaatgacgatggctgacatgaaaaagtcaggtggaagt
gtttcaagatcggctgccattctggagaaacatggtggtatgccttcgtctcgcaaacta
tcaacaatgaatgctgcctcacttcgacctggtgggtcaaggccaagctatggggcattc
ggtcctctgggagagagccgtgacggcagctcaggcatgcgaagcggagatgcccgtcgc
aatatgagcaacgataagagagtcgcctcctctcgacgcccagctccggtcaagccagcg
gcgcccgttgagcaaaagccgaagatcatggaacctgaggtcctcaagcgaaaggcaaga
agcattgcactagaatactggtcaattgggttgatcaaagaagcccaggaatgtatcgtc
gaagaggtgaagcctgtgaactatgcgaaattcctgcgtgagatcattaagttctcactc
agcgcaaaggttcaagaccggctgaaatcaatttcgcttctggttgggttgcttggagat
accatttcagagactcttttcatctcggcattttcggacgtcgttgccgagctgtctgat
atcgaaatggacgatccccgtgcaagtgaatttcttgcgaagtatgtcgcggccatcgcg
tgctctggaaaactatcagcccaaaagagcgatgtgttcggccttgacttccttaagaag
gccttgccatcaattggtgatgccaagagggaatcgaagttcgtcatctgtattttcgca
gatatttacgagcacctaagcaaaaccatagcagacgaagaacaaaataagaatgcaata
aggaacgcattgactgcacttgatgtagatctttccgcgaggatgtactcatggaacgcg
caaataggaatgaagtctcttgactcaatgctgaaagacgctggcatttctttcgttgtc
cctctgttaccaatgcagctccgattaaaggaaaccttggaaacctctccctctgcaagt
gcgttggagaaggtattcaactcctcagaacaaccaaaagacgatctccgaagcccgtcg
tttatgaagatggtgatcaggacatcatttgactggttgttcatgaagcctccatctagt
gtgaaggacgttttcggggaagttgtgggaaagcctctcgtccagtctttcaacggagaa
atcccgcgggatgtgcagatggctgccctactggaaacgcagtcatttatcgttcgaaac
ttagatatattgcccgcccacaaggaaggcgactacgacaagccaggtagtatcgtgttt
gatagcctttatttcgcagatgttgtcgaagaggacacatttctgggatggagggaggac
actgatgagagcacacgggtagaagggaaagacaaaatgattatgcagacgtctgctttc
tttcgatggttggaaacagctgaggaagaatag
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integrated database retrieval system
