Chondrus crispus (carragheen): CHC_T00008699001
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Entry
CHC_T00008699001 CDS
T02916
Name
(RefSeq) alpha-tubulin
KO
K07374
tubulin alpha
Organism
ccp
Chondrus crispus (carragheen)
Pathway
ccp04145
Phagosome
ccp04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
CHC_T00008699001
09142 Cell motility
04814 Motor proteins
CHC_T00008699001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccp03019
]
CHC_T00008699001
03036 Chromosome and associated proteins [BR:
ccp03036
]
CHC_T00008699001
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ccp04812
]
CHC_T00008699001
04147 Exosome [BR:
ccp04147
]
CHC_T00008699001
Messenger RNA biogenesis [BR:
ccp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
CHC_T00008699001
Chromosome and associated proteins [BR:
ccp03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
CHC_T00008699001
Cytoskeleton proteins [BR:
ccp04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
CHC_T00008699001
Exosome [BR:
ccp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CHC_T00008699001
Exosomal proteins of other body fluids (saliva and urine)
CHC_T00008699001
Exosomal proteins of colorectal cancer cells
CHC_T00008699001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
Motif
Other DBs
NCBI-GeneID:
17321001
NCBI-ProteinID:
XP_005713293
UniProt:
R7Q7R7
LinkDB
All DBs
AA seq
447 aa
AA seq
DB search
MREIISLHIGQAGVQVANSCWELFCLEHGIAPSGNLTPEKEADPGTDSYSTFFSETSAGK
RIPRAIFLDLEPTVIDEVRSGTYKDLYHPEQLISGKEDAANNYARGHYTVGKEIVDEALD
RIRKLADNCTGLQGFLVFSSVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPLVSTS
VVEPYNSVLATHSLLEHLDVGVVLDNEAIYDICRRSLGIKRPSYSNLNRLIAQVVSSLTA
SLRFDGTLNVDINEFQTNLVPYPRIHFMLSAYAPIVSAEQAYHEESSVAEITNSVFEPNA
SFAKCDPRSGRYIAVSLTYRGADIFPKDVNAAVAAVKTRKSVQFVEWSPTGVKLGINSRP
PTKVPDDPLAKTHRAVCSIANSTAIAEVFARVNAKFDLMYMKRAFVHWYVGEGMEEGEFA
EARENLAMLEHDYAEVSKDDEEEADEY
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagatcatctctctccacatcggccaagccggcgtgcaagtagccaactcctgc
tgggagctcttctgtctcgaacacggcattgccccgagcggcaacttgacgcctgagaag
gaagccgaccccggcacggactcctactccactttcttctccgaaacgtccgccggcaag
cgcattccgcgtgccatctttctcgacctcgagcccaccgtcattgacgaagtgcgctct
ggcacctacaaagacctctaccatccggagcaactcatcagcggcaaggaggacgccgcc
aacaactacgcccgcggccactacaccgtcggtaaggagatagtggacgaagctctggac
cgcatccgcaaactcgcagacaattgcaccggcctgcagggcttcctcgtcttctcgtcc
gtgggagggggaacaggctccggccttggatcccttcttctcgaacgcctctccgtcgac
tatggaaagaagtctaagcttggcttcacggtctatccatccccgctagtctccacttcg
gttgtggagccatacaattcggttttggcaactcactcccttctggagcaccttgacgtc
ggtgttgtcctcgacaacgaggccatctacgatatctgccgccggtcgttgggcattaag
cgcccgtcatactcgaacctcaacaggctcattgcgcaagtagtttcctcgctcactgct
tctctgaggttcgacggaacgctcaacgttgacatcaatgagttccagactaatctagtg
ccctacccgcgcatccatttcatgctttcagcgtacgctccaattgtgtctgcggaacaa
gcataccacgaggagtcaagcgtagccgaaatcacaaactcggtgttcgagccgaatgcg
tcgtttgccaagtgcgaccctcgctccggacgttacattgcggtatcgctgacgtaccgg
ggtgcggatatcttcccgaaggatgtgaacgcggcagtggccgcggtgaagacgaggaag
tctgtgcagttcgttgagtggtctccaactggggtaaaactagggatcaactcgaggccg
ccgacgaaggtgccggatgatcccctggctaagacgcatagagctgtatgctcaatcgcc
aactcgactgctattgctgaggtgtttgcaagagtgaacgccaagttcgatctcatgtac
atgaagagggctttcgtgcattggtatgtgggcgagggtatggaagagggagaattcgca
gaggccagggagaaccttgcgatgctggagcatgactatgcggaagtctccaaagacgac
gaggaggaagcggacgagtattag
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