Chondrus crispus (carragheen): CHC_T00008771001
Help
Entry
CHC_T00008771001 CDS
T02916
Name
(RefSeq) threonine--tRNA ligase, cytoplasmic
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
ccp
Chondrus crispus (carragheen)
Pathway
ccp00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CHC_T00008771001
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ccp01007
]
CHC_T00008771001
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccp03016
]
CHC_T00008771001
Enzymes [BR:
ccp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
CHC_T00008771001
Amino acid related enzymes [BR:
ccp01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
CHC_T00008771001
Transfer RNA biogenesis [BR:
ccp03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
CHC_T00008771001
Prokaryotic type
CHC_T00008771001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
TGS
tRNA_SAD
Motif
Other DBs
NCBI-GeneID:
17326296
NCBI-ProteinID:
XP_005718581
UniProt:
R7QMH0
LinkDB
All DBs
AA seq
657 aa
AA seq
DB search
MDVAMSISETLGRKALVAVVNGSQWDMTRPFEADSTLKICDFNTAEGKSVLWHSTAHMLG
EAMEYKYKGELCIGPPLEDGFYYDIHLPNDQKIHESDFDDLNKRVDKIAKQKRTFERLEL
TKEEAKDMFSYNPFKLEIISELAEDATITAYRDGPFIDLCRGPHVPQSSRSKAMMCKGTG
QAYWRAKSENPSLQRVYGISFPDKKQLKEYKHLIEEAAKRDHRLLGVKQELIMFSQLSPG
CPFFLPHGQRIFNTLQEFMRQQYWIHDYMEVQTPNMFDFDLWIQSGHAANYKDNMYSLDV
EAREYGLKPMNCPSHCHIFKARARSYRELPLRLADFGVLHRNELSGTLGGLTRVRRFQQD
DAHIFCTEDQVKEEVSRYLIFLKSVYDKFGFDYELHLSTRPEKYLGTVSLWDKAEKMLTD
ALVEFTGKECGEKGGWELNAGDGAFYGPKIDIQLYDALRRRHQCATLQLDFQLPLRFDLQ
YQAGSAPAAHKEEAAANPSSNGVGEGAAKASECTSDPSVPASSDCSRPVILHRAIFGSFE
RFIGILIEHYAGFWPFWLSPRQAIVVPVSEKFLDYAKKVQSELRQGMFHVEIDTSDRTLG
KKLAEARNSYYNTILVVGEQELNDSTVNLRTRGVDKTEVLSVPAVSEKFEQWRKDYQ
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atggatgtcgcgatgtccattagcgagacgctaggcaggaaagcccttgttgctgtcgtc
aacggctcccagtgggacatgactcgaccttttgaagcggattctacgttaaagatttgt
gacttcaacacggcggagggaaaatccgttctatggcattccactgcacatatgctcggt
gaagccatggagtataagtacaagggtgaattgtgcattggaccaccgctcgaggatggt
ttctattatgacattcatctacccaatgatcaaaagattcacgagtcggacttcgatgat
ttgaacaagcgcgttgacaagattgcgaaacagaagcgcacgttcgagcgtctcgagctg
accaaagaggaagccaaagacatgttttcttataatcctttcaagcttgaaatcatctcc
gaacttgctgaggacgcaactattacggcataccgcgatggccctttcatagatctttgt
cgtggtcctcacgtgccccagagctcgcgctcgaaagccatgatgtgcaaaggaaccggt
caggcatactggcgtgccaaatccgagaacccctctttgcaaagagtctatggtatctcc
tttcctgacaaaaagcaactgaaggagtacaaacacttaatagaggaagctgcgaaacgc
gatcatcgcctccttggcgtaaagcaggagctcattatgttcagtcagctttcccccggc
tgtccattctttctacctcacggccagcgcatcttcaatactctgcaggaatttatgagg
cagcagtactggatccacgactacatggaggtccagacacccaacatgttcgacttcgat
ctgtggattcaatcagggcacgcagccaactacaaagataacatgtattctctcgatgtc
gaggcccgagaatacgggctcaagcccatgaattgtcctagccattgtcacattttcaaa
gcacgtgcgagatcgtatcgcgagctgccgttgcgactagctgatttcggagtccttcat
agaaatgaactttccgggacactgggagggctgacgagagtgagacgtttccaacaggat
gacgctcatattttctgcacagaagaccaagtgaaagaggaagtgagccgctatttgata
ttcctgaagtctgtatacgacaaattcggattcgactacgagttacatctatccacgagg
cctgagaagtatcttggaacggtatctctctgggacaaagccgagaaaatgttaacagac
gctcttgtggaattcactgggaaggaatgcggagagaagggtggttgggaactcaatgcc
ggggacggtgctttttacggacctaaaatcgacattcagctatacgatgctctacgtcgg
cgacaccaatgcgccacattgcagctggatttccaacttccgcttcgcttcgatttgcag
tatcaagccggaagtgcgccagcagctcataaggaagaagcagcagctaacccgagtagt
aatggtgtcggcgaaggagcggcaaaggcgtcggaatgcacatctgacccatctgtaccg
gcttcgagtgattgctcccggccggtcattcttcaccgagccatttttggttcctttgaa
cgcttcataggaattttgatcgagcattacgctggattctggccattctggctttcacca
agacaagcgattgtcgtcccagtttctgagaagttcctggattacgccaagaaggtgcaa
agcgagttgaggcagggtatgttccacgttgaaatcgacactagtgaccgcactctcggc
aagaaactggcggaagccaggaacagttactacaatacaattcttgttgtgggagagcag
gagcttaatgacagcacggtaaatttgcgcactagaggtgtcgacaaaacggaggtattg
tcagtaccagcagttagcgagaagtttgagcagtggcgcaaggactaccaataa
DBGET
integrated database retrieval system
