Chondrus crispus (carragheen): CHC_T00008811001
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Entry
CHC_T00008811001 CDS
T02916
Name
(RefSeq) long-chain-fatty-acid-CoA ligase
KO
K15013
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ccp
Chondrus crispus (carragheen)
Pathway
ccp00061
Fatty acid biosynthesis
ccp00071
Fatty acid degradation
ccp01100
Metabolic pathways
ccp01212
Fatty acid metabolism
Module
ccp_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
CHC_T00008811001
00071 Fatty acid degradation
CHC_T00008811001
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ccp01004
]
CHC_T00008811001
Enzymes [BR:
ccp01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
CHC_T00008811001
Lipid biosynthesis proteins [BR:
ccp01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
CHC_T00008811001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-GeneID:
17325371
NCBI-ProteinID:
XP_005717654
UniProt:
R7QJ35
LinkDB
All DBs
AA seq
637 aa
AA seq
DB search
MSSPMSNDKAPSKSRTWSTSISSERPIVIRAGRVPISYNAALKAVVDKDPERIQYVTADD
REVTLREFYALSRSVAKSCLQLGLAKCQGTSILGFNSVEWFAADVGTTLAGGVPAGIYTT
NKQEIVSYILNDSKSLVLFVDDEEALQKAISSKSQCDSLQAVVVWGNVDLSRFPDHRSYV
YTWDEFLSLGADLPDAELDARIDAAKPENVAKLIYTSGTTGAPKAVMISHDNVTFTVDLV
ARITGASVGDHMVSYLPSSHIAANSIDIIGATLSGQTMHIARPDALKGSLVETMKKVRPT
IFLAVPRVFEKIQERLSQVGASSGPIKTAIAKWAKNVGTQACLARDDADELMPWGYELAN
FLVFKNVRKALGLDRCRIVFNAAAPLQKATFDYFRSLDFQIYDIYGLSEATGPITCSYPD
YRRGTSGKVVPGLEVKLANEDSTGEGELCFRGRSMFVGYLGNEEETAKTMDEDGYMHSGD
LGRVSEDGFITITGRAKDLIVTAGGENVAPALCEASLISAMPAISRAFAVGDQRKFVSCL
LVPYIDSDGNLISPASNVSPNVKTAEQATSDATWSKYIQEGLQKANEGAISNAAKVKKFT
LLDRDFTVDTGELTPTMKVKRKIVVQNFQAQIDAMYG
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctccaatgtcaaacgacaaagcaccatccaagtctcgcacgtggtcaacctcc
atctcatctgagcgcccaatcgtcattcgagccggccgtgtgcccatatcttacaacgcc
gccctcaaagcagtcgtagacaaagatccagagcgcatccagtatgtcaccgcagacgat
cgggaggtaactctgcgtgagttttacgccttgtctcgcagtgttgcaaaatcctgcctt
cagctaggtttggcaaagtgccaaggcacaagcatccttggctttaacagtgtcgagtgg
ttcgccgctgatgtcggcaccactctcgccggtggtgtcccagcgggaatctatactacc
aataagcaggaaattgtctcctacattctgaacgacagcaagtccctcgtgctgttcgtc
gacgatgaagaggccttacagaaggccatctcttccaagagtcagtgtgatagcctccaa
gctgtcgtagtttggggtaatgttgacctttcacgttttccagatcaccgctcctatgta
tacacatgggacgagtttctgtctttgggcgccgatctccccgacgcagaattggatgcc
cgcatagacgcggctaaacctgaaaacgtcgcaaaactgatatacacaagcggcacaaca
ggtgctcccaaggccgtcatgatctcgcacgacaacgttaccttcaccgttgatctcgtc
gcacgcattacaggagcgtccgtgggcgatcatatggtttcgtacctaccgtcctcccac
atcgctgcgaattccatcgacatcattggggccacactgtccggccagaccatgcatatc
gcacggccagatgccctgaaaggcagcctcgtggaaacgatgaagaaggttcgcccaacc
atattcttagctgttccaagagtctttgagaagattcaagagcggctctcacaagtcggt
gccagctccggccccattaaaacggcgattgcgaagtgggcgaaaaacgttgggacgcag
gcctgtttagcaagagatgacgctgatgaacttatgccgtggggttacgagctcgcgaat
ttcttggtctttaagaacgtacgcaaagcccttggattggatcgatgcagaattgtgttt
aatgcagcagcgcccctgcaaaaagccacctttgattatttccgaagcctagacttccaa
atctacgatatatacggtttgagcgaggccacaggtcccatcacatgcagctatcccgac
taccgacgaggcacttccggtaaggtagttccagggcttgaagttaagcttgcgaacgag
gactcaactggtgaaggtgagttatgtttccgcgggcggagtatgtttgttggatatctc
gggaatgaagaagaaacggcgaagaccatggacgaagacgggtatatgcattccggtgac
ttgggacgtgtgagcgaagacggcttcattaccatcactgggagggcaaaggatctcatt
gtgactgctggcggcgaaaacgtggcaccggcgctgtgcgaagcgagtctgatttctgct
atgccagccattagccgagcgttcgccgtgggagatcaacggaaatttgtctcttgtctt
ctagtgccgtacatcgattcggacggtaacctgataagcccggcttcgaacgtctctcct
aatgtgaagacggcagaacaggctacgagtgatgctacttggagtaaatatatacaagaa
gggttacaaaaggccaacgaaggtgcgatttccaacgcggccaaagtgaaaaaattcaca
cttctcgatcgggacttcaccgtggatactggtgagctgacacctacaatgaaagtcaag
aggaagattgttgtacagaatttccaagcacagatcgatgcaatgtacggatga
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