Chondrus crispus (carragheen): CHC_T00008870001
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Entry
CHC_T00008870001 CDS
T02916
Name
(RefSeq) alpha-tubulin
KO
K07374
tubulin alpha
Organism
ccp
Chondrus crispus (carragheen)
Pathway
ccp04145
Phagosome
ccp04517
IgSF CAM signaling
ccp04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
CHC_T00008870001
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
CHC_T00008870001
09142 Cell motility
04814 Motor proteins
CHC_T00008870001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccp03019
]
CHC_T00008870001
03036 Chromosome and associated proteins [BR:
ccp03036
]
CHC_T00008870001
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ccp04812
]
CHC_T00008870001
04147 Exosome [BR:
ccp04147
]
CHC_T00008870001
Messenger RNA biogenesis [BR:
ccp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
CHC_T00008870001
Chromosome and associated proteins [BR:
ccp03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
CHC_T00008870001
Cytoskeleton proteins [BR:
ccp04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
CHC_T00008870001
Exosome [BR:
ccp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CHC_T00008870001
Exosomal proteins of other body fluids (saliva and urine)
CHC_T00008870001
Exosomal proteins of colorectal cancer cells
CHC_T00008870001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
Motif
Other DBs
NCBI-GeneID:
17324458
NCBI-ProteinID:
XP_005716716
UniProt:
R7QEG0
LinkDB
All DBs
AA seq
447 aa
AA seq
DB search
MREIISLHIGQAGVQVANSCWELYCLEHGISPTGELTEEKKANPGNDSFSTFFSETSSGK
HIPRAIFLDLEPTVVDEVRSGTYRQLYHPEQLITGKEDAANNYARGHYTVGKEIVDTALD
RIRKLADNCTGLQGFLVFSSVGGGTGSGLGSLLLERLSVDYGKKCKLGFTVYPSPQVSTS
VVEPYNSVLATHSLLEHLDVGVVLDNEAIYDICRRSLGIMRPTYSNLNRLIAQVVSSLTA
SLRFDGTLNVDINEFQTNLVPYPRIHFMLSAYAPIVSSEKAYHEESSVAEITNSVFEPNA
SFAKCDPRSGRYIAVSLNYRGLDIFPKDVNVAVGTVKTKKSVQFVEWSPTGVKIGINSQQ
PTKIPNDELAKAQRSVCSMANSTAIAEVFARIDAKFDLMYAKRAFVHWYVGEGMEEGEFS
EARENLAMLEHDYAEVSGEADEDEDEY
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagatcatctccctccacatcggccaagccggcgtgcaagtcgccaactcctgc
tgggagctgtactgcctggagcacggcatctcgccgacgggcgagctgactgaggagaag
aaggccaacccgggcaacgactccttctccacctttttctcggagacctctagcggcaag
cacatcccgcgcgccatcttcctggacctggagcccaccgtcgtcgacgaggtccgctcg
ggcacgtaccgccagctctaccatcctgagcagctcatcaccggcaaggaggacgccgcg
aacaactacgcccgcggccactacaccgtcggcaaagagatcgtcgacaccgccctggac
cgcatccgcaagctcgccgacaactgtaccggccttcagggcttcctggtcttctcgtcc
gtcggtggcggtaccggatccggcctcggatctctccttttggagcgcctctccgtcgac
tatggcaagaagtgcaagctcggcttcaccgtctacccgtcgcctcaggtctccacctcc
gtcgtggagccttacaactccgtccttgctactcattcgcttctcgagcatctggacgtc
ggtgtcgtgcttgacaatgaggccatctatgatatctgccgtcgctcgttgggcatcatg
cgccccacctattccaacctcaacaggcttatcgcacaggttgtgtcctctctgacggcc
tccctcaggttcgatggtactctcaatgttgatatcaatgagttccaaaccaacctggtt
ccgtatccccgcattcatttcatgctctccgcatacgctccgatcgtctcctccgagaag
gcctaccacgaggaatcgagtgttgccgagatcaccaactctgtcttcgagccgaatgcc
tcgttcgccaagtgcgatccccgctccggtcgctacatcgctgtctctctcaactaccgt
ggtctcgacatcttcccgaaggacgtcaacgtcgctgtcggtaccgtcaagacgaagaaa
tcggtccagtttgtcgagtggtccccgacgggtgtgaagatcggtatcaactcgcagcag
cccactaagatccccaacgatgagctcgccaaggcccagaggtccgtctgctccatggcc
aactctactgctatcgctgaggtgtttgctcgcattgacgctaagttcgatctcatgtac
gccaagcgcgccttcgtgcattggtacgtcggagagggtatggaggagggtgagttctca
gaggcccgtgagaaccttgccatgctcgaacacgactatgccgaggtttccggtgaagcg
gatgaggacgaggacgaatactaa
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