Chondrus crispus (carragheen): CHC_T00008876001
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Entry
CHC_T00008876001 CDS
T02916
Name
(RefSeq) WD40-repeat containing protein
KO
K14855
ribosome assembly protein 4
Organism
ccp
Chondrus crispus (carragheen)
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccp03009
]
CHC_T00008876001
Ribosome biogenesis [BR:
ccp03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
CHC_T00008876001
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40
Beta-prop_IFT122_1st
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
EIF3I
WDR55
WD40_Gbeta
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_TEP1_C
Beta-prop_Aladin
DSE1_N
Beta-prop_WDR41
ANAPC4_WD40
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
CFAP251_N
Beta-prop_WDR36-Utp21_1st
Beta-prop_EIPR1
Beta-prop_RIG_2nd
NBCH_WD40
ASA1
WD40_MABP1-WDR62_1st
NLE
PAC11
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_Nup120_160
Beta-prop_DCAF12
Ge1_WD40
Beta-prop_ACSF4
Beta-prop_SPT8
Beta-prop_WDR35_TULP_N
Beta-prop_WDR75_2nd
Beta-prop_DCAF4
Beta-prop_Vps41
TRM82_WD
Beta-prop_HPS5
Beta-prop_VPS8
Beta-prop_NUP159_NUP214
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
17325078
NCBI-ProteinID:
XP_005717362
UniProt:
R7QJ72
LinkDB
All DBs
AA seq
488 aa
AA seq
DB search
MASTDVAMDKGETTIIQFQSAEGEKAGPSLDIPLSSTPEQLTSLLNELLENDEPLPYAFF
LSDSREEVTKSLKLAMKSVSVGKEKILSITFQPQSLFRVRSVTRCTSSLPGHEEAILTSA
FSPDSKSLATGSGDTTVRCWNPESQLPDKTLRGHKQWVLAICFSPDALRLATASMDGSVR
VWDPTLGEIIGKPLLGHKKWVTSLFWQPYHLSTKCTHLVSASKDNTLRIWNTAASTCYKV
LAGHSAAVTCVRWSGENVIYSASQDRTIKVWDPQTGLVVRNISAHGHWINTMTLNTDYVL
GCGAFPMLDEATGYIAKKLDAVVASRRYEDVKRKMVGGKERLITGSDDFTLIMWEDLANN
LSKHAKPVTRMTGHQQLVNDVRYSPDGVYIASASFDKSVRLWDGASGKFLFTFRGHVGAV
YRIVWSADARLLLSASKDSTCKVWEMRTRKLKSDLPGHSDEVYTVDWSIDGKRAVSAGKD
KVVKIWHH
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggcaagcacggatgtcgccatggataagggcgagacaacaataattcaatttcagtct
gctgagggtgagaaagccggtccctctcttgatataccactctcctcaactcctgaacaa
ctcacaagtctcctaaacgaattactcgaaaatgacgagccactgccgtatgcatttttt
cttagcgactcccgggaagaggttacaaagtcgctcaaattggcaatgaagagtgtgtct
gtgggaaaagagaagatattgtccattacgtttcagccacagtcactgttccgcgttcgc
tccgttactagatgtacatcctctttacctggacacgaggaagctattctcacctctgct
ttctctccagattccaagtcactggcaacagggtctggagatactaccgtacgatgctgg
aatccggaatcgcagcttcccgacaagacgctgaggggacacaagcagtgggtgttagcc
atttgcttttctcccgacgctttgcggctcgctactgcttcgatggatggttcggttaga
gtatgggatccgacgctaggcgaaatcatagggaagcctttgctagggcataagaagtgg
gttacctcactcttttggcaaccataccatctatccaccaaatgcactcaccttgtttct
gcatcaaaggacaatacgttgagaatatggaacactgcggcttcgacgtgctacaaggtg
ttagcaggccatagcgcagccgtcacgtgcgtcaggtggtctggtgaaaatgtcatctac
tctgcttctcaagatagaacgataaaggtttgggacccgcagacggggctagttgttcgt
aacattagtgctcacggtcattggataaataccatgactctgaacacagactatgtttta
ggatgcggggcgttcccgatgttggacgaagcaactggttacatcgcgaagaaactcgac
gcggtagttgcgagcagaaggtatgaggatgtcaagcggaagatggtgggtgggaaggaa
cgactaatcactggctctgatgactttactctcatcatgtgggaggacctcgcaaataac
ctgtcgaaacatgcgaagcccgtgactcgcatgaccggacaccaacaactcgtcaacgat
gtgcgctacagtccggacggagtatatatcgcatcagcgagttttgacaagagcgtgcgg
ttgtgggatggagcttcaggtaaattcctcttcacattccgaggacatgttggtgctgta
tatcgaattgtttggtctgctgacgcgcgcctgttgctcagcgcgtctaaagacagcacc
tgtaaagtctgggaaatgagaacgagaaaactgaaatcagatctgcctggtcattcggat
gaagtttacaccgtggactggagcatcgacggaaagagagcagtttctgcggggaaggat
aaagtagttaagatttggcatcattaa
DBGET
integrated database retrieval system