Chondrus crispus (carragheen): CHC_T00008903001
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Entry
CHC_T00008903001 CDS
T02916
Name
(RefSeq) WD40-repeat containing protein
Organism
ccp
Chondrus crispus (carragheen)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_THOC3
WD40_Prp19
WD40
Beta-prop_IFT122_1st
Beta-prop_WDR3_2nd
WD40_Gbeta
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_SPT8
Beta-prop_EML
NBCH_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR41
Beta-prop_Aladin
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_WDR36-Utp21_1st
Beta-prop_pof12
Beta-prop_ACSF4
DSE1_N
Beta-prop_DCAF12
Beta-prop_VPS8
ASA1
TRM82_WD
Beta-prop_HPS5
Beta-prop_IFT140_1st
WHD_MalT
WHD_DRP
APAF1_C
Motif
Other DBs
NCBI-GeneID:
17321521
NCBI-ProteinID:
XP_005713803
UniProt:
R7Q7K4
LinkDB
All DBs
AA seq
973 aa
AA seq
DB search
MLASGAKPEEANDPRCKEAVREILKLCAGLPLALNVAGTGVRYMRDRWEGEKSQAWEAYL
SKMKSCNTIRSESPGDGYLLSLDATLHASLEIVESGMGSDAERLGQFSFRKIHRSLCVMK
KQDGMPLSLVRELWEMDYDSAEKYVKQMERVGLVDIHYDKDCGWVRMHDLTHDFAVQEAQ
KEESVTVWYKKLADVCRQGGGLLAMTESEGRESKDAREKYVFENIYRVLKQGGYVEELKN
LFLRARWVKAVIQRGSVLQYEEAVKDLNSFLRNTGASESLLRDTGEEDSVYAMELMMRAA
RLSVPFCGESSAGIYFQLYGRIKHRASQLGSVRRILEEIEEHAPRPWVRPVSECVGRAGG
SLVEQIVLPNIVYEVGMDSTGGVYGHCSDLGYTRITVFTQSPDKEMKMTELDNDFGTGSR
ELTCGCVSMSKRYAVIGYGDGTLQFWSVSEKKILWSDCGHESRVSSVAMSGDGKRAVSGS
RDSSVRVWDVDTGLQIGDALTGHTGWVESVAMSGDGKRAVSGSYDDSVRVWDVDTGLQIG
DALTGHTDGVESVAMSGDGKRAVSGSLDESVRVWDVDTGLQIGDALTGHTSYVDSVAMSG
DGKRAVSGSWDESVRVWDVDTGLQIGDALTGHTGRVESVAMSGDGKRAVSGSYDESVRVW
DVDTGLQISDAPTGHTGEVDSVAMSGDGKRAVSGSRDMSVRVWDVDTGLQIGDALTGHTH
WVLSVGMSGDGKRAVSGSYDKSVRVWDVDTGLQIGDALTGHTNGVLSVGMSGDGKRAVSG
SRDKSVRVWDVDTGLQIGDALTGHTDEVYGVGMSGDGKRAVSGSGDKSVRVWDVDTGLQI
GDALTGHTSLVSRVGMSGDGKRAVSGSWNRSVRVWDVEKGSTVHLGKLEDWQDIVERFLN
AENLRAVSRTGHRHKRLKVFESRGTKIVHEREDGSEAVLAQLESTVIWWEVDDNHGVFVA
AAGSRVAIMKLVV
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atgctcgcgagcggggcgaagccagaggaagcgaatgatccgagatgcaaagaggctgtg
agggaaatattgaaattgtgtgctggtttgccgcttgctctgaacgtagccgggacgggt
gtcaggtacatgagagatagatgggagggagaaaagtcacaagcgtgggaggcatacctt
tcgaagatgaagagctgtaacacgattcgtagtgagagtccaggggatgggtatttgttg
tcgttagacgcgacattacatgcgtcactagagattgtggagtccggcatggggagcgat
gcggagaggttaggtcagttttcgtttcgaaagatacatcggagtctgtgtgttatgaag
aagcaagacgggatgcctttgtcgttggtaagagagttgtgggaaatggactacgactcg
gctgaaaagtatgtgaagcagatggaaagggttggattagtagacattcattacgacaag
gattgtgggtgggtacggatgcatgatctgacgcacgattttgcggtgcaggaggcgcag
aaggaggaaagtgtaacggtctggtataagaagttggcagatgtatgcaggcagggaggg
ggactgcttgctatgactgagagcgagggcagagagagcaaggatgcaagagagaagtat
gttttcgagaatatatatcgcgttctgaaacagggcgggtatgtggaggagctgaagaat
ctatttttgagagcgcgatgggtgaaggcagtgatacagagaggaagtgtgttgcaatac
gaggaagctgtaaaggatctaaatagctttttgaggaacacgggagcaagcgagagcctt
ttaagggatacgggagaagaagattcggtgtatgcgatggaattgatgatgagagctgca
cgactgagtgtacctttttgtggtgaaagcagtgcagggatttactttcaactgtacgga
agaatcaagcacagggcatcacaattaggaagcgtgcgaaggatactcgaggaaatcgag
gaacacgcgccacgaccatgggtgcggcctgtgagtgaatgtgtagggcgagcgggagga
agtttggtggagcagattgtgcttccgaatatcgtttacgaagtcggcatggactcaacc
ggtggcgtgtatggacactgttcggacctgggctataccaggatcacagttttcacacag
tctccggacaaggaaatgaagatgactgaattagacaacgattttggaacggggagccga
gaattaacatgcggttgtgtcagtatgagcaaacgctatgcagttatcggatatggtgat
gggacactacagttctggagtgtatcggaaaagaaaattttgtggagtgactgcggtcat
gaatcgcgggtgtctagcgttgcgatgagtggtgatggaaaacgtgcagtatctggatcc
cgggacagcagcgtacgagtttgggacgtggacacaggactgcaaatcggcgacgcatta
actggacacacgggttgggtagagagcgttgcgatgagtggtgatggaaaacgtgcagta
tctggatcgtatgacgacagcgtacgagtttgggacgtggacacaggactgcaaatcggc
gacgcattaactggacacacggatggggtggagagcgttgcgatgagtggtgatggaaaa
cgtgcagtatctggatccttggacgagagcgtacgagtttgggacgtggacacaggactg
caaatcggcgacgcattaactggacacacgagttacgtggatagcgttgcgatgagtggt
gatggaaaacgtgcagtatctggatcctgggacgagagcgtacgagtttgggacgtggac
acaggactgcaaatcggcgacgcattaactggacacacgggtcgggtggagagcgttgcg
atgagtggtgatggaaaacgtgcagtatctggatcgtatgacgagagcgtacgagtttgg
gacgtggacacaggactgcaaatcagcgacgcaccaactggacacacgggtgaggtggat
agcgttgcgatgagtggtgatggaaaacgtgcagtatctggatcccgggacatgagcgta
cgagtttgggacgtggacacaggactgcaaatcggcgacgcattaactggacacacgcat
tgggtgcttagcgttgggatgagtggtgatggaaaacgtgcagtatctggatcgtatgac
aagagcgtacgagtttgggacgtggacacaggactgcaaatcggcgacgcattaactgga
cacacgaatggggtgcttagcgttgggatgagtggtgatggaaaacgtgcagtatctgga
tcccgggacaagagcgtacgagtttgggacgtggacacaggactgcaaatcggcgacgca
ttaactggacacacggatgaggtgtatggcgttgggatgagtggtgatggaaaacgtgca
gtatctggatcgggagacaagagcgtacgagtttgggacgtggacacaggactgcaaatc
ggcgacgcattaactggacacacgagtttggtgtctcgcgttgggatgagtggtgatgga
aaacgtgcagtatctggatcctggaacaggagcgtacgcgtttgggacgtggagaaaggg
agtacagttcatctcggaaagttggaggactggcaagatatcgtggagagatttctgaat
gcagaaaacttacgtgccgtctctcgcactggacataggcacaaaaggctcaaggttttt
gagagcagggggacgaaaattgtgcatgagcgagaggatggctctgaggctgttttggcg
cagctggagagtacggtaatctggtgggaggtagacgataatcatggggtctttgttgca
gcggctggcagccgggtagctattatgaagctggtggtctag
DBGET
integrated database retrieval system