KEGG   Chondrus crispus (carragheen): CHC_T00008977001
Entry
CHC_T00008977001  CDS       T02916                                 
Name
(RefSeq) 26S proteasome ATP-dependent regulatory subunit
  KO
K03063  26S proteasome regulatory subunit T3
Organism
ccp  Chondrus crispus (carragheen)
Pathway
ccp03050  Proteasome
Brite
KEGG Orthology (KO) [BR:ccp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    CHC_T00008977001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:ccp03051]
    CHC_T00008977001
Proteasome [BR:ccp03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    ATPase subunits
     CHC_T00008977001
SSDB
Motif
Pfam: AAA Prot_ATP_ID_OB_C AAA_lid_3 AAA_16 AAA_5 AAA_2 DUF815 AAA_22 nSTAND3 AAA_28 RuvB_N NPHP3_N TIP49 AAA_14 RNA_helicase AAA_18 Mg_chelatase AAA_7 AAA_3 TsaE DUF5906 Sigma54_activat AAA_24 NACHT Parvo_NS1 AAA_25 IstB_IS21 AAA_30 ATPase NTPase_1 AAA_33 DUF3450 NB-ARC AAA_19 Bac_DnaA Torsin HIP1_clath_bdg
Other DBs
NCBI-GeneID: 17327047
NCBI-ProteinID: XP_005719329
UniProt: R7QNR1
LinkDB
AA seq 413 aa
MDAVHLSAMEVEAGGGSVTTLEKPAVPADDNSEDLYVKYKTLERQLEFIEIQESYVKDEM
NSLKRELLHAQEEVKRIQSVPLVIGQFLEMVDANSGIVGSTTGSNYFVRILSTINRELLK
PSSSVALHRHSNALVDILPPEADSTISMMGADEKPDVSYSDIGGLDIQKQEIREAVELPL
THAGLYEQIGIDPPRGVLLYGAPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPR
MVRDVFRLARENAPAIIFIDEIDAIATKRFDAQTGADREVQRILMELLNQMDGFDQHSNV
KVIMCTNRADTLDPALLRPGRLDRKIEFPMPDRRQKRLVFQVVTGRMNLADEVDLEEFVS
RPDKISGAEIASICQEAGMQAVRKNRYVVLQSDFETAYKANVQKDDEEFAFYK
NT seq 1242 nt   +upstreamnt  +downstreamnt
atggacgccgtacatctcagcgcgatggaagtcgaggccggcggcggctccgtcacgact
ctggaaaaacccgctgtccctgcagacgacaactcggaagacctttacgtcaagtataag
acgcttgagcgccagctggagttcatcgagatccaggaaagctacgtcaaggatgagatg
aactctctcaaacgcgagttactccacgctcaggaagaggttaaacgcatccaatcagtc
ccgctcgtcatcgggcagtttctggaaatggtcgatgccaacagtggcatcgtgggctcc
acaacggggtccaattactttgttaggatcctctccaccatcaatagggaactgctcaag
cccagctcgtctgtcgccttgcaccgccattccaacgccctcgtcgacattctaccgccc
gaggctgactccaccatttctatgatgggggccgatgagaagccagacgtctcgtactcg
gacattggtggcctggacatccagaaacaggagatccgcgaggccgttgagctcccactc
acccacgcaggtctgtacgagcagattgggatcgacccgccgaggggtgtgctgctatac
ggagccccgggtacgggtaagacaatgctggcaaaggccgtggccaatcacaccacagcc
gccttcatccgcgtcgtgggttcggagtttgtccaaaagtatttaggggagggaccgcgt
atggtccgcgatgtgtttcgattggcgcgggaaaacgccccggccatcatctttattgat
gaaattgatgcaatcgccaccaaaaggtttgacgcccagacgggcgccgatagggaggtg
cagcgtattctcatggagttgttaaatcagatggacggttttgatcagcactccaacgtc
aaggtcatcatgtgcacgaatcgggctgacacgttggacccggctctgctgaggccgggc
cggctggatcggaagattgagtttccgatgccggatcgcaggcagaagaggttggtgttc
caggtggtcacagggaggatgaacttagcggatgaggtcgacttggaggagtttgtgtct
aggccagataagatcagtggcgcggagattgcgtccatttgtcaggaggcagggatgcag
gccgtgagaaagaatcggtatgtcgttttgcagtcggactttgagacagcgtacaaggca
aacgtgcagaaggacgatgaagagtttgccttctacaagtaa

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