Chondrus crispus (carragheen): CHC_T00009015001
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Entry
CHC_T00009015001 CDS
T02916
Name
(RefSeq) Syntaxin
KO
K08490
syntaxin 5
Organism
ccp
Chondrus crispus (carragheen)
Pathway
ccp04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
CHC_T00009015001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccp04131
]
CHC_T00009015001
Membrane trafficking [BR:
ccp04131
]
SNARE
Syntaxin (Qa)
Stx-cisGolgi
CHC_T00009015001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNARE
Syntaxin-5_N
DUF16
DUF1930
Motif
Other DBs
NCBI-GeneID:
17319501
NCBI-ProteinID:
XP_005711798
UniProt:
R7Q2M4
LinkDB
All DBs
AA seq
337 aa
AA seq
DB search
MRRRRAGPVLQPTTSSGTTSSSAWRMTLAAPTSVRNRTAEFATILDAARAASTPGNKPPP
KVPSVHLAPRSEFTRLAAHVGKDIQGTSVKLAELTKLAQRRSLFNDPTAEISELTYVIKQ
DIAALNGKLADLQRLRDATKRSANKHAGDHSENVVDSLKGRLGATAEGFKKVLKMRTDSL
AAQQDRRSHFMGANQPSAPMFTQPAGNVALDLGQGSLGAAASGSTGHAGTAGTTQHLSLM
RRPGETTYQDARADAVRQVESTIVELGQIFNQLATMVSEQGELVERIDANVEETVTHMDA
GQNQLMLYYNSIAGNRALILKVFGVLLAFLVLWTVIL
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaggaggcgggcaggcccagtcctacaaccgaccacttcgtccggcaccacaagc
tcaagtgcttggaggatgaccctcgccgcgcccacctcggtgcgcaaccgaactgcggag
ttcgccacaattctggatgctgcccgagctgcgtccacaccaggcaataagccacctcca
aaagttcccagtgtgcatctagcgccacgctccgaattcacgcgtctcgcagcccatgtc
ggcaaagacatccagggaacttccgtaaagcttgcagagcttacgaagctcgcgcagagg
cgttccttattcaatgaccctaccgcagaaatttcagaacttacgtatgtcatcaagcaa
gatattgcagccctcaacggaaagctcgcggatttacagcgattgcgagatgccaccaaa
cgctccgcgaacaagcacgcgggtgatcattctgagaatgttgttgattcgttgaagggg
aggctaggtgcaaccgctgagggatttaagaaggtattgaagatgcgaacagatagcctg
gcagcgcagcaagatcgccgctctcacttcatgggggcaaatcagccgtctgctccaatg
tttacacagcctgccggaaatgtcgcgctagacctagggcaaggctccctcggcgcagcg
gccagtggaagcaccggtcatgcaggtaccgctggtaccacacaacatctatccttgatg
cgaagaccaggggaaacaacataccaagacgcgagagcagatgctgtccgtcaagtagaa
agtacgattgttgagcttgggcaaatattcaaccagcttgccaccatggtctcggaacaa
ggtgaactcgttgagcgaattgacgcaaatgttgaggagactgtcactcacatggacgct
ggtcagaatcagctaatgttgtattacaatagtattgcgggaaatcgtgcactgatactc
aaagtattcggggttttgttagcgttcttagttctttggaccgtaattctatag
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