Chondrus crispus (carragheen): CHC_T00009059001
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Entry
CHC_T00009059001 CDS
T02916
Name
(RefSeq) exportin 1 (Xpo1)
KO
K14290
exportin-1
Organism
ccp
Chondrus crispus (carragheen)
Pathway
ccp03008
Ribosome biogenesis in eukaryotes
ccp03013
Nucleocytoplasmic transport
ccp03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CHC_T00009059001
03008 Ribosome biogenesis in eukaryotes
CHC_T00009059001
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
CHC_T00009059001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccp03019
]
CHC_T00009059001
03009 Ribosome biogenesis [BR:
ccp03009
]
CHC_T00009059001
03016 Transfer RNA biogenesis [BR:
ccp03016
]
CHC_T00009059001
03036 Chromosome and associated proteins [BR:
ccp03036
]
CHC_T00009059001
Messenger RNA biogenesis [BR:
ccp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
CHC_T00009059001
Ribosome biogenesis [BR:
ccp03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
CHC_T00009059001
Pre-60S particles
CHC_T00009059001
Transfer RNA biogenesis [BR:
ccp03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
CHC_T00009059001
Chromosome and associated proteins [BR:
ccp03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
CHC_T00009059001
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
TPR_XPO6_C
Aip3p_Bud6_N
TPR_TNPO3_IPO13_2nd
IBN_N
DUF6015
Motif
Other DBs
NCBI-GeneID:
17323836
NCBI-ProteinID:
XP_005716122
UniProt:
R7QET9
LinkDB
All DBs
AA seq
1031 aa
AA seq
DB search
XIRYRWKTLPRSTCESIRNYVVNKVIALSETDESLSRDGVFVSKLNLILVQIVKQEWPDK
WGSFISDIVGASKGSVPLCENNMKIMRLLSEEVFEFSAGEMTQDKVSHLRTRFNEDFSRI
FDLCQYVFSSAADLQQSRPSLLIATLKMLEKFLSWIPVGYIFETQIIDVLVGFVAVDPLR
NATMPCLVEIAGLSGNIVSQYDDRFRFLFVSFVQRLTSVWPLNVDIASAYEEADDETQGF
VMDLALFFTNFFRYHVSLVDTDMTPDVRNAFRSAYEYLVKISRVPDVEVFKTCLEWWFKL
ASDLYDNECHIPSAAERSRPLLLNMPSSPQSPPMGNMVTAGPGSEFVSQKRAFYAPILSE
VRHVMISRMAKPEEVLIVEDENGEIVRETTKDTDAIALYKTMRETLVFLTHLDTTNTESI
MLCKLALQIENREWSWNNLNTLCWAIGSISGAMGEEEERKFLVTVIKELLILCENKRGKD
NKAVVASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHETHPGVQDMACDTFLKIAQKC
RHKFVSLQTREAKPFIVEMLETLPEIIQKLETHQIQSFYESCGCIIASESDELTRNQLIM
KLFELPNSSWSQLLYSAGVSEEVWCQRAKMKNFSGILRTNSRVATSLGSPYLVQLDYIYG
DMLKVYKAYSELIQKAVMNGGQYASKSSDVRNMRAVKREVLRVIETCISTLHDTDREKIQ
EKVIEPLTDVVLGDYVQSAPDVREPAVLSLYSAIVSFMKGSLSTAAVRVIFKSLVGVTLV
MIKNNFEDFPDARINFFLLLRSINHHQFASLFALDENPSAAEAEFRIIINAIAWAFKHTE
RNVAETGLQILLEMLRNVDSSPFANYFYRIYFKSILNDILYVLTDTLHRPGFKLHAQILM
HLIGAVGSGRITEPIWDQQQPEEVALASANGSSSPSNALYLHYHLLKILKAAFPNLSDGQ
VTDIVKALLSGSDDKTFKGHLRDFLVQTKEFSAGDNTDLFDEEKQMKDLEKEKAERDRLA
RTPGLIAPSNI
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
nnnattcgctacagatggaagacgctccctagatctacctgcgaaagtatcagaaactat
gttgtaaacaaggtcatcgcactctccgaaacagatgagagcctatcgcgcgacggagtg
tttgtttcaaagctcaatctcattctcgtccagatcgtcaaacaggaatggccggataag
tggggttcctttatttccgacattgtgggtgccagcaaggggagtgtcccgttgtgtgag
aataacatgaagattatgagactgctttctgaagaagttttcgagttttccgcaggggag
atgactcaggataaggtcagccacctaagaacccgatttaacgaggatttttctcgcatc
ttcgatctgtgccaatatgttttctcttcggccgcagatctgcaacaatcgagaccatcg
cttctcattgccactctcaaaatgctcgagaagttcctctcttggataccggttggttac
attttcgagacacaaatcatagacgttctggttggctttgtagcggtcgacccgctgagg
aacgccacaatgccatgtctagttgaaatcgcaggcttatcagggaacattgttagccag
tacgatgaccgctttcgctttttgtttgtatctttcgtgcagcgcttgacatcggtgtgg
cctctcaatgtcgatatagcctcagcatacgaagaagcggacgatgaaactcagggcttt
gtcatggatcttgcgttgtttttcacgaacttttttcgatatcatgtgtctctggttgat
actgacatgacaccagatgtacgaaatgcatttagaagtgcttacgagtacctggtgaag
atttcgcgcgtaccagatgtggaagtgtttaaaacttgccttgaatggtggtttaagctt
gcatcagatctttacgataatgagtgtcacattccgtcggccgctgagcgtagtcgtcct
ttgcttttgaacatgccatcgagtccgcagagccctccgatgggaaatatggtaacagcg
ggtccgggatctgaatttgtatcgcagaaacgagcattttatgcgccaattctttcggag
gtgagacacgtgatgatttcacgcatggcaaagcctgaagaagttctcattgtcgaagat
gaaaacggagaaattgtgagagagacaactaaagacacagatgccattgccctgtataag
acaatgcgagaaaccctcgtctttttgactcatttggacactacgaacacagaaagcatc
atgctttgcaagcttgccttgcagattgagaacagggaatggtcctggaacaatctgaat
accttgtgctgggcaataggaagcatctcaggggcaatgggagaagaagaagagagaaag
ttcctggtgaccgtcatcaaagaactccttatcttgtgtgagaataagcgcgggaaggat
aacaaagctgttgttgcatcaaacattatgtacgtcgtcgggcagtatcctcgatttctt
cgggcacactggaaattcttgaagacagttgtcaacaagcttttcgagtttatgcatgag
acacatccaggggtgcaggacatggcatgcgacacttttctcaaaattgcgcaaaagtgt
aggcacaagtttgtgagtttgcaaacaagagaggcgaagccttttattgttgagatgtta
gagacgcttcccgaaatcattcagaagctcgagacacatcagatccaatccttttacgaa
tcatgcggatgcattattgcaagcgaatccgatgagttgacaagaaaccagctcatcatg
aagctttttgaactgccgaatagcagctggtctcagttgttgtattcagcaggggtctcg
gaagaagtttggtgccaaagagcaaaaatgaaaaacttctctggcattctgcgtactaac
tctcgcgtggccacttctctgggctctccatacttagtgcaactggattacatttacggg
gatatgctcaaggtgtacaaagcatactcggaattaatacaaaaggcagttatgaacggg
ggtcaatatgcgtcaaagagttcagatgtccggaatatgagggccgtaaagcgtgaggta
ctccgcgtcattgaaacttgcatcagcacgctacacgacacagaccgggaaaaaattcag
gagaaggtaattgagcctttgacagacgtcgtgctcggagactacgtgcaatcggcccct
gatgttcgtgagccagcggtgttatcactctattccgcaattgtttcttttatgaaggga
agcttgtccacagctgcagtacgggtgatcttcaagtctcttgtgggagttactctagtc
atgatcaagaacaactttgaagactttcccgacgctagaatcaactttttcctgctactg
agatcaatcaaccatcatcagttcgcctcattgtttgctcttgatgaaaacccatctgct
gcagaggcagaatttcggatcattatcaacgcaatagcgtgggccttcaagcacacagag
cgcaacgttgcggaaactggtctgcaaatccttctggaaatgcttcggaatgttgactcc
tccccatttgcgaactacttctaccgaatttacttcaagtcaatccttaatgacatcttg
tatgtcttgaccgacacccttcataggccagggtttaaacttcatgcccagatcttgatg
cacctcattggcgccgtgggttctggtcgaataacggaaccaatctgggatcaacaacaa
ccggaagaagtcgcactcgcatcagccaatggaagttcttctccctcaaatgccctgtac
ctacattatcacttgctcaagattttgaaggcagctttccccaacttgagcgatgggcaa
gtgactgacattgtcaaagcacttctctctggttcagacgacaagacgttcaagggccat
ttgcgagattttcttgttcagacgaaagaattctcggctggagacaacacagacttgttt
gatgaggaaaagcaaatgaaagacttggagaaggagaaagcagagcgagataggctagca
aggactcctggtctaatagcgccttccaacatctga
DBGET
integrated database retrieval system
