KEGG   Chondrus crispus (carragheen): CHC_T00009072001
Entry
CHC_T00009072001  CDS       T02916                                 
Name
(RefSeq) Rab geranylgeranyltransferase, beta subunit
  KO
K05956  geranylgeranyl transferase type-2 subunit beta [EC:2.5.1.60]
Organism
ccp  Chondrus crispus (carragheen)
Brite
KEGG Orthology (KO) [BR:ccp00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:ccp01006]
    CHC_T00009072001
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ccp04131]
    CHC_T00009072001
Enzymes [BR:ccp01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.60  protein geranylgeranyltransferase type II
     CHC_T00009072001
Prenyltransferases [BR:ccp01006]
 Protein prenylation
  Rab geranylgeranyltransferase
   CHC_T00009072001
Membrane trafficking [BR:ccp04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    CHC_T00009072001
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
    CHC_T00009072001
SSDB
Motif
Pfam: Prenyltrans SQHop_cyclase_N SQHop_cyclase_C
Other DBs
NCBI-GeneID: 17320726
NCBI-ProteinID: XP_005713011
UniProt: R7Q5U4
LinkDB
AA seq 252 aa
MTCYNPTIGAFAGNTDQDAHLLYTLSGIQILAIYDNLSLIDVDKVVSYIRGLQKPDGSFA
GDEWGEIDTRFSYCALLSLSILNRLDAVDVDAAVAFVLSCQNFDGGFGCIPGAESHAGQV
FCCVGALALADALRRIDAELLGWWLCERQLPCGGFNGRPDKLEDVCYSWWVLASLAMLGK
ADWVDARKLREFILACQDEEDGGIADRPGDMADIFHTFFGFAGLSLMEEEGFEKIDPAFA
LAESVVARIGGG
NT seq 759 nt   +upstreamnt  +downstreamnt
atgacatgctacaaccccaccatcggtgccttcgccggcaacaccgaccaagacgcgcac
ctgctctacaccctctcgggcatccagatcctcgccatctacgacaacctttccctcatc
gacgtggacaaagtcgtctcctacatccgcggcctgcagaagccggacggcagcttcgcc
ggcgacgaatggggcgagatcgacacgcgcttcagctactgcgcgttgctcagcctatca
attctcaaccgcctggacgccgtggacgtcgacgccgcggtggccttcgtgctctcgtgc
cagaacttcgacggcggcttcggctgcatccccggcgcggagagccacgccgggcaggtg
ttctgctgcgtgggcgcgctcgcgctcgccgacgcgctgaggaggatcgacgcggagctg
ctcggctggtggctctgcgagcgccagctgccgtgcggagggttcaatggacggccggat
aagctcgaggacgtgtgctactcgtggtgggtgctcgctagcttggccatgctggggaag
gccgactgggttgatgcgcggaagctgagggagtttattctcgcgtgtcaggacgaagag
gacggcgggattgcggaccggcccggggatatggcggatatttttcacaccttcttcggg
tttgcgggtctctcgctgatggaggaggaggggttcgagaagattgatcccgcttttgcg
ctcgcggagagtgtcgtcgctcgcattggagggggatga

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