KEGG   Chondrus crispus (carragheen): CHC_T00009086001
Entry
CHC_T00009086001  CDS       T02916                                 
Name
(RefSeq) WD40-repeat containing protein
  KO
K24730  cytosolic iron-sulfur protein assembly protein CIAO1
Organism
ccp  Chondrus crispus (carragheen)
Brite
KEGG Orthology (KO) [BR:ccp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ccp03036]
    CHC_T00009086001
   03400 DNA repair and recombination proteins [BR:ccp03400]
    CHC_T00009086001
Chromosome and associated proteins [BR:ccp03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    CHC_T00009086001
DNA repair and recombination proteins [BR:ccp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     CHC_T00009086001
SSDB
Motif
Pfam: WD40 Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 EIF3I Beta-prop_TEP1_2nd Beta-prop_WDR35_TULP_N WDR55 Beta-prop_RIG_2nd WD40_MABP1-WDR62_2nd Beta-prop_Aladin Beta-prop_EML Beta-prop_WDR36-Utp21_2nd Beta-prop_IFT122_1st Beta-prop_EIPR1 Beta-prop_WDR75_1st Beta-prop_IFT140_1st Beta-prop_WDR36-Utp21_1st WD40_Gbeta Beta-prop_WDR90_POC16_2nd Beta-prop_WDR41 Beta-prop_WDR19_1st Beta-prop_DCAF12 Beta-prop_HPS5 Beta-prop_SCAP NBCH_WD40 WDR90_beta-prop_4th MIOS_WD40 WD40_like
Other DBs
NCBI-GeneID: 17321162
NCBI-ProteinID: XP_005713442
UniProt: R7QQ90
LinkDB
AA seq 370 aa
MPRLELQASLYGHKGAVWSVAWSPRGLLASCGADKTVRVWHRAEGGAWRSVAVFGDATFV
RAVRDLSWASDGRSLACASFDASAFVLELMGGKTPHLEAAVSLEGHDSEVKSVAYSSSGA
LLASCSRDKSVWVWEVGLDFDYECIAVLNGHAADVKMVAWHPTVEMLVSTSFDGTVRVWV
EDEDDWFCAETLAGHNGTVWAAAFGEGGTGLATVAADGGLAIWSRENPPANLAGANPAFQ
VVARYPKLHAGPIYSVDWNKSNSLLATGGGDDCIRIIQCTEISSPNAPSETSKTKEESTA
NGSVPEQSAITSNLKKRCEVMATEMRAHSGDVNRVAWNPIDQDILASSGDDGLVKIWKYC
SDVDKKANGT
NT seq 1113 nt   +upstreamnt  +downstreamnt
atgccgcgtctcgagctccaagcgtcgctgtacgggcacaaaggcgccgtctggtcggtc
gcgtggtctccgcgggggctgctagcctcctgcggcgcggacaagaccgtgcgcgtgtgg
caccgcgccgagggcggcgcgtggcgtagtgtcgccgtcttcggcgacgccaccttcgtc
cgcgcagtcagagacctgtcgtgggcctccgacggccgctcgctggcgtgcgccagcttc
gacgcttcggccttcgtgctcgagctcatgggcgggaagaccccgcacttggaggccgcc
gtgtcgctcgaggggcatgacagcgaggtcaagagcgtcgcgtacagctcctccggcgcc
ttgctggcctcttgttcgagggataagagcgtgtgggtttgggaggtcggcctggacttt
gactatgagtgcatcgccgtgctgaatggacacgccgcagatgtcaaaatggtcgcgtgg
catccgactgtggagatgctcgtgtcgactagctttgacggcaccgtgcgtgtgtgggtc
gaggacgaggacgattggttttgcgcagagaccctcgcggggcacaatggtaccgtctgg
gcggccgcgtttggtgagggcggaacaggtttggccacagttgcggcggatggcgggctc
gccatatggagcagggagaatcccccagctaatcttgccggagcgaatcctgcttttcag
gtcgtcgctcgctaccccaagctgcatgcaggtccgatatactcggttgattggaataag
agtaactctttactagcgacgggaggtggcgatgattgcattcgcatcattcaatgtaca
gagatttcctcaccaaatgcaccttcggaaacttccaaaacgaaggaggagtcaacggct
aacggcagcgttccagaacaatctgcgatcacatcgaatctgaaaaagcggtgcgaggtc
atggcaacagaaatgcgagcccattccggtgacgtgaatcgcgttgcgtggaatccaatt
gatcaggacattttagcctcttccggtgatgatggactcgtgaagatttggaaatattgc
tccgatgttgacaagaaggccaacggaacatag

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