Chondrus crispus (carragheen): CHC_T00009102001
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Entry
CHC_T00009102001 CDS
T02916
Name
(RefSeq) Putative tryptophan synthase beta subunit (Fragment)
KO
K01696
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
ccp
Chondrus crispus (carragheen)
Pathway
ccp00260
Glycine, serine and threonine metabolism
ccp00400
Phenylalanine, tyrosine and tryptophan biosynthesis
ccp01100
Metabolic pathways
ccp01110
Biosynthesis of secondary metabolites
ccp01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CHC_T00009102001
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
CHC_T00009102001
Enzymes [BR:
ccp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
CHC_T00009102001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PALP
Motif
Other DBs
NCBI-GeneID:
17326726
NCBI-ProteinID:
XP_005719007
UniProt:
R7QNP4
LinkDB
All DBs
AA seq
315 aa
AA seq
DB search
MVLADPTEIIDTHFSPEKPDATGHFGRFGGQFVPETLMQNLEELYAGYMSIKDDPSFQAE
LAGLLKDYVGRATPLYFAERLTERYAREDGTGPQIYLKREDLTHTGAHKINNSLAQVLLA
RRLGKTRIIAETGAGQHGVATATVCARFGLQCVVFMGVKDMERQKLNVFRMRLLGAEVKP
VSDGKGTLTEALSAAIRDWVTYPVETHYIVGSVAGPHPYPMMVRDFHSCIGKEVRWQAME
KWGGKPDVLLACVGGGSNAMGLFDDWKADMGVRLIGVEAAGKGVDTQEHAATLTKGKLGV
LHGAMSYQLQTLDAI
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggtgctcgcggacccgacagagatcatcgacacccacttctcccccgaaaagcccgac
gccaccggccacttcggccgcttcggtggccaatttgtgccggagacgctgatgcaaaac
ctcgaggagctctacgcgggctacatgtccatcaaggacgacccctccttccaggccgag
ctagcggggcttctcaaggactacgtaggtcgcgccacgccgctgtactttgcggagcgc
ctcacggagcgctacgcccgcgaagacggcaccggcccgcagatctaccttaagcgcgag
gacctgacgcacacgggcgcgcacaagatcaacaactcgctcgcgcaggtcctgctcgcg
cgccgcctgggcaagacgaggatcatcgccgagacgggcgccggccagcacggcgtggcc
acggcgaccgtgtgcgcgcgcttcggcctgcagtgcgttgtcttcatgggcgtcaaggat
atggagcgccagaagctcaacgtcttcaggatgaggctgctgggcgccgaggtcaagccg
gtgagcgacgggaagggcacgctcacggaggcgctgtcggcggcgattagggactgggtt
acgtacccggtcgagacgcattacattgtgggcagcgtggccggcccgcatccgtacccg
atgatggtgcgcgactttcatagctgcatcgggaaggaggtgaggtggcaggcgatggag
aagtggggcgggaagccggatgtgttgctggcttgtgtagggggcggatcgaatgcgatg
ggcctgttcgatgactggaaggccgacatgggcgtgaggttaatcggcgtcgaggcggct
ggtaagggcgtggatacgcaagaacacgccgcgacgctgacaaaggggaagctcggcgtg
ctgcatggcgcgatgagctatcagctgcagacgctggatgccatatga
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