Chondrus crispus (carragheen): CHC_T00009106001
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Entry
CHC_T00009106001 CDS
T02916
Name
(RefSeq) WD40-repeat containing protein
KO
K11801
DDB1- and CUL4-associated factor 11
Organism
ccp
Chondrus crispus (carragheen)
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccp04121
]
CHC_T00009106001
Ubiquitin system [BR:
ccp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
CHC_T00009106001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_MABP1-WDR62_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
ANAPC4_WD40
Beta-prop_RIG_2nd
WD40_CDC20-Fz
Beta-prop_WDR19_1st
EIF3I
Beta-prop_CAF1B_HIR1
WDR55
PD40
Motif
Other DBs
NCBI-GeneID:
17318186
NCBI-ProteinID:
XP_005710466
UniProt:
R7QNU5
LinkDB
All DBs
AA seq
419 aa
AA seq
DB search
MSAQPNQLHFVRSHRFSFMSPSGARYRHRPSAPLPVPSEARVDLATEINRATELPSARAS
VSRLRALDALARGEECSFAALAHGIIPDVAQRFVDRYGERVYGGRFVGEDGKRFVTSCQD
PSIRVYETNGCEKRAAWKLTHEIKGLGVHWTITDFDISPDGRWLAYVSLNRLVHVVDLEN
VREAQTVFDLSVGAGFSVNIWSIKWSHDGSEIVAGTGGNGRSCYGNVIIFDVQLGKIVQV
LSAHTDDVNSVCFMRTGERNLILSASDDALGKAQLPTLRLRLPEARKVDPTMLTCRNARA
YDSETLGPSRHVNARPKLASPRGGGVCGAPVRANVRLDQGRRAFPSQQREGPVHQAVGRA
QVHVKLRAGAGVVAAARPVVRLPAAVPAAGNGAARLPRRRGDVVRGRARDAADADPGVL
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgcagccgaaccagttacactttgtccgtagccaccgcttctccttcatgtcg
ccttccggcgcgcgctaccggcaccgcccctcagcaccgctgccggtgccgtcggaggcg
cgcgtggacctagcgacggagatcaaccgcgcgacggagctgccgtccgcgcgcgcctcc
gtttcgcgtctgcgcgcgctggacgcgctcgcgcgcggcgaggagtgctcgttcgcggcg
ctcgcgcacgggatcatcccggacgttgcgcaacgcttcgtcgacaggtacggggagcgc
gtctacggcgggaggtttgttggggaggacgggaagaggtttgtgacttcatgtcaggac
ccgtcgatcagagtgtatgagacgaacggttgcgagaagagggccgcgtggaaactgacc
cacgagatcaagggcctgggcgtgcactggaccatcacggactttgacatcagcccggac
ggtcggtggctggcgtacgtgagcttgaaccggctcgtgcatgtcgtcgacttggagaac
gtgcgcgaggcgcagacagtgtttgatttgagcgttggggcagggttctctgttaacatt
tggagcatcaagtggagccatgacgggagtgagattgtggcggggacgggcgggaacggg
aggagctgctatggaaatgttattatttttgatgtgcaactcgggaagattgtgcaggtg
ctgtcggcgcacacggacgacgtgaattcggtgtgttttatgcggacaggcgagcgcaac
ctcattctgtcggcgtcggacgacgctctaggtaaggcccaattgccaactttgcgtttg
cgtttacccgaagcgcgtaaggtggacccgacgatgctaacctgtcggaatgcgcgtgcg
tatgacagtgaaactctgggaccgtcgcgacacgtcaacgcgcgaccaaagctcgcatca
ccgcgcggcgggggtgtttgtggggcaccagtgcgggctaacgttcgtctcgaccaagga
cgacgggcgtttccttctcagcaacgggaaggaccagtacatcaagctgtgggacgcgcg
caagtgcacgtcaagctccgagctggggcaggtgtcgtggccgccgcgcgacctgtcgtt
cgactaccggcggcagtgcccgcggctggaaacggggcggcgcggcttccacgacgacgc
ggtgatgtcgtacgcgggcgcgcacgagacgctgcagacgctgatccgggcgtactttag
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