KEGG   Chondrus crispus (carragheen): CHC_T00009106001
Entry
CHC_T00009106001  CDS       T02916                                 
Name
(RefSeq) WD40-repeat containing protein
  KO
K11801  DDB1- and CUL4-associated factor 11
Organism
ccp  Chondrus crispus (carragheen)
Brite
KEGG Orthology (KO) [BR:ccp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ccp04121]
    CHC_T00009106001
Ubiquitin system [BR:ccp04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     CHC_T00009106001
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_MABP1-WDR62_2nd WD40_WDHD1_1st Beta-prop_EML_2 ANAPC4_WD40 Beta-prop_RIG_2nd WD40_CDC20-Fz Beta-prop_WDR19_1st EIF3I Beta-prop_CAF1B_HIR1 WDR55 PD40
Other DBs
NCBI-GeneID: 17318186
NCBI-ProteinID: XP_005710466
UniProt: R7QNU5
LinkDB
AA seq 419 aa
MSAQPNQLHFVRSHRFSFMSPSGARYRHRPSAPLPVPSEARVDLATEINRATELPSARAS
VSRLRALDALARGEECSFAALAHGIIPDVAQRFVDRYGERVYGGRFVGEDGKRFVTSCQD
PSIRVYETNGCEKRAAWKLTHEIKGLGVHWTITDFDISPDGRWLAYVSLNRLVHVVDLEN
VREAQTVFDLSVGAGFSVNIWSIKWSHDGSEIVAGTGGNGRSCYGNVIIFDVQLGKIVQV
LSAHTDDVNSVCFMRTGERNLILSASDDALGKAQLPTLRLRLPEARKVDPTMLTCRNARA
YDSETLGPSRHVNARPKLASPRGGGVCGAPVRANVRLDQGRRAFPSQQREGPVHQAVGRA
QVHVKLRAGAGVVAAARPVVRLPAAVPAAGNGAARLPRRRGDVVRGRARDAADADPGVL
NT seq 1260 nt   +upstreamnt  +downstreamnt
atgtctgcgcagccgaaccagttacactttgtccgtagccaccgcttctccttcatgtcg
ccttccggcgcgcgctaccggcaccgcccctcagcaccgctgccggtgccgtcggaggcg
cgcgtggacctagcgacggagatcaaccgcgcgacggagctgccgtccgcgcgcgcctcc
gtttcgcgtctgcgcgcgctggacgcgctcgcgcgcggcgaggagtgctcgttcgcggcg
ctcgcgcacgggatcatcccggacgttgcgcaacgcttcgtcgacaggtacggggagcgc
gtctacggcgggaggtttgttggggaggacgggaagaggtttgtgacttcatgtcaggac
ccgtcgatcagagtgtatgagacgaacggttgcgagaagagggccgcgtggaaactgacc
cacgagatcaagggcctgggcgtgcactggaccatcacggactttgacatcagcccggac
ggtcggtggctggcgtacgtgagcttgaaccggctcgtgcatgtcgtcgacttggagaac
gtgcgcgaggcgcagacagtgtttgatttgagcgttggggcagggttctctgttaacatt
tggagcatcaagtggagccatgacgggagtgagattgtggcggggacgggcgggaacggg
aggagctgctatggaaatgttattatttttgatgtgcaactcgggaagattgtgcaggtg
ctgtcggcgcacacggacgacgtgaattcggtgtgttttatgcggacaggcgagcgcaac
ctcattctgtcggcgtcggacgacgctctaggtaaggcccaattgccaactttgcgtttg
cgtttacccgaagcgcgtaaggtggacccgacgatgctaacctgtcggaatgcgcgtgcg
tatgacagtgaaactctgggaccgtcgcgacacgtcaacgcgcgaccaaagctcgcatca
ccgcgcggcgggggtgtttgtggggcaccagtgcgggctaacgttcgtctcgaccaagga
cgacgggcgtttccttctcagcaacgggaaggaccagtacatcaagctgtgggacgcgcg
caagtgcacgtcaagctccgagctggggcaggtgtcgtggccgccgcgcgacctgtcgtt
cgactaccggcggcagtgcccgcggctggaaacggggcggcgcggcttccacgacgacgc
ggtgatgtcgtacgcgggcgcgcacgagacgctgcagacgctgatccgggcgtactttag

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