KEGG   Chondrus crispus (carragheen): CHC_T00009428001
Entry
CHC_T00009428001  CDS       T02916                                 
Name
(RefSeq) long-chain-fatty-acid-CoA ligase
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
ccp  Chondrus crispus (carragheen)
Pathway
ccp00061  Fatty acid biosynthesis
ccp00071  Fatty acid degradation
ccp01100  Metabolic pathways
ccp01212  Fatty acid metabolism
ccp04146  Peroxisome
Module
ccp_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:ccp00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    CHC_T00009428001
   00071 Fatty acid degradation
    CHC_T00009428001
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    CHC_T00009428001
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:ccp01004]
    CHC_T00009428001
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ccp04147]
    CHC_T00009428001
Enzymes [BR:ccp01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     CHC_T00009428001
Lipid biosynthesis proteins [BR:ccp01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   CHC_T00009428001
Exosome [BR:ccp04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   CHC_T00009428001
  Exosomal proteins of breast cancer cells
   CHC_T00009428001
SSDB
Motif
Pfam: AMP-binding MAP6
Other DBs
NCBI-GeneID: 17319319
NCBI-ProteinID: XP_005711585
UniProt: R7QUY3
LinkDB
AA seq 663 aa
MSLLSTDVSAPLSPDSTVRGCGWATSFDPAVPHPGHPALPSMYALLLRSAAAFPNAPCLG
WRASAAPDAPFEWWTYADVVAKTDALGRALRDMGVEKGDRVGMYARNCPQWTLMQYAMLS
QGFVVVPIYDTLGPNVVEYVCNHAQVKVVCVSAENYPKLASVRDTGKTPTVSRVVVLGHG
DIEPTPEAITGEGVVDIVMVLDEGKSLAKEGVHEPPEVTLDDLMVLMYTSGTTGDPKGVR
LSHRAVLASVSSAFAFFDKWDAAFTHEDSMLSYLPLSHIFEQQAEGLMLGKGARIGFYSG
DIRKLLNDLEVLKPTVFAGVPRVFARFQQKIEQGVEESSFIKKTLFHWGYARQLRAVENP
GVVGRMGLWDRLIFEKVRAKILPKTRLVITGSAPMSGQTNDFLKICFNCPVVQGYGLTET
VGGMNCSVPDLSKSGTCGGPLPGVQVKLRDLPDMGYLNQDKPYPRGEVCVKGAIVFDGYH
ENEKATKEAFTEDGFFRTGDVGQWLEDGSLQIIDRAKNLFKLSQGEYVSPEALEQEYNKA
KLCGQIFVYGNSLHATLLAVVVPDVPAAEAWGKHRGLTTMESIAAAPGFKKELLEQLAEI
REKSHFKKYETIRDVVIEVSDLNEMGQGFTVDNNLMTPSFKLKRPQLKTKYQGALDALYD
QKQ
NT seq 1992 nt   +upstreamnt  +downstreamnt
atgtctctcctcagcacggatgtgtcggccccgctgtcgccggactcgaccgtccgcggt
tgcggctgggcgacgagcttcgacccggccgtgccgcaccccggccatccggccctgccg
tccatgtacgcgctcctcctgcgctcggccgcggccttcccgaacgccccgtgcctcggt
tggcgcgcctccgccgccccggacgcccccttcgagtggtggacctacgcggacgtcgtc
gccaagacggacgccctgggccgcgccctgcgcgacatgggcgtggagaagggcgaccgc
gtcggcatgtacgcccgcaactgcccgcagtggaccctcatgcagtacgccatgctgagc
cagggctttgtcgtcgtcccgatctacgataccctcggcccgaacgtcgtcgagtatgtg
tgcaaccacgcccaagtcaaagtcgtttgcgtctcggctgagaattatcccaagctcgcg
agcgtgagagacacaggcaagacgcccactgtttcgagggtcgtcgtcctggggcacgga
gacatcgagcctacgccggaggccattactggagagggggttgtggatattgtcatggtg
ctggatgaggggaagagcctggcgaaggaaggtgttcacgagccgccggaggttaccctg
gacgacttgatggtactcatgtatacgtcggggacgacgggtgaccccaagggcgtcagg
ctttcgcatcgtgcggtgctggcgagcgtttcgtctgccttcgcctttttcgacaaatgg
gacgctgcgtttacgcatgaggactctatgctgagctaccttccgctgagccatatcttc
gagcagcaggccgagggtctgatgctcggaaagggcgccaggatcggcttctactctggc
gatattagaaagctgcttaacgatctcgaggtgctcaagcccaccgtgtttgcgggcgtg
ccgcgcgtctttgcccgctttcagcagaagatcgagcagggcgttgaggaatcgagcttt
atcaagaagaccctcttccactggggctatgccaggcagctgcgcgccgtggagaacccg
ggcgtcgtcggtaggatgggcctatgggacaggcttatctttgaaaaggtcagagccaag
atcttgcccaaaaccaggctcgtgattacgggctcggcgcccatgtccgggcagacgaat
gactttttgaagatttgcttcaattgccccgtcgtgcagggctacggcctcacggagacg
gtgggagggatgaattgttccgtcccggacctgtccaagtctggtacgtgcggcgggccc
ttgccgggcgtgcaggtcaagctgcgggaccttccggacatggggtatctcaaccaggac
aagccgtacccgcgcggggaggtttgtgtcaagggcgcgatagtgttcgacgggtaccac
gagaacgagaaggcgaccaaggaagcgtttacggaggacgggttcttccgtacgggcgac
gtcgggcaatggctcgaggacgggtcgctgcagatcatcgaccgggccaagaacctgttc
aagctctcgcagggcgagtacgtgtcgcccgaggcgctggagcaggagtacaacaaggcc
aagctctgcgggcagatcttcgtctacggcaactcgctgcacgcgacgctactcgccgtc
gtcgtgcccgacgtcccggccgcagaggcgtggggaaagcaccgcggcctcacgaccatg
gagagcatcgccgccgcgccgggcttcaagaaggagttgctcgagcagctcgctgagatc
agggagaagagccactttaagaagtatgaaaccattcgcgacgtcgtgattgaggtgagc
gatcttaacgagatgggacaaggttttacggtggataacaacctcatgacgccctccttc
aagcttaagcggccgcagttgaagaccaagtatcagggtgcgttggatgcgctgtatgac
cagaagcagtaa

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