Chondrus crispus (carragheen): CHC_T00009471001
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Entry
CHC_T00009471001 CDS
T02916
Name
(RefSeq) cell differentiation protein rcd1
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
ccp
Chondrus crispus (carragheen)
Pathway
ccp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CHC_T00009471001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccp03019
]
CHC_T00009471001
Messenger RNA biogenesis [BR:
ccp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
CHC_T00009471001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rcd1
Roquin_1_2-like_ROQ
Motif
Other DBs
NCBI-GeneID:
17327130
NCBI-ProteinID:
XP_005719411
UniProt:
R7QQ64
LinkDB
All DBs
AA seq
286 aa
AA seq
DB search
MAAPMKTNEAQVHELVLDLTNPEKRETALLELSKKREAFSDLAPMLWYGLGTVAALLQEI
ISIYPLLTPPALSAHASNRVCNALALLQCVASHQTTRTHFLTAHIPLFLYPFLNTVSKTR
PFEYLRLTSLGVIGALVKMDAPDVINFLLQTEIIPLCLRIMETGSELSKTVATFIVQKIL
LDDTGLTYICATPERFYAVSTVLRNMVAALVNAPSARLLKHVIRCYLRLSDNPRARDALR
HCLPEALDDDTFGNLLETDPSTKKWLMHLLYQLDSNTPQVGPGQPM
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggcggctcccatgaagaccaacgaggctcaagtacacgagctagtgctagatctcaca
aacccggagaagcgcgaaaccgcacttctagagctcagtaagaagcgcgaagcgtttagc
gaccttgctccgatgctctggtatgggttggggacggtcgcggctttgcttcaggaaatc
atctcaatttaccccttactaactcctccggccctgtcggcacatgcaagcaatcgcgtc
tgcaacgcactggccctcctccaatgcgttgcctctcaccaaaccacgcgcactcatttc
ctcactgcacacattccactcttcttgtatccgttcctgaatacagtctcaaagacaagg
ccgttcgagtacttgcgattaacctcgctcggagtcattggagccctggtcaagatggat
gctccggatgttatcaactttcttctgcaaacagagatcattcccctctgtttgcgcatc
atggaaactggttcagagctgagcaaaactgtcgctacttttattgtccagaagatattg
ttggacgacactggcctgacctacatttgtgcgacaccggagaggttttacgcggtctct
accgtcttacgcaatatggttgccgcgctcgtgaacgctccaagcgctcgcctgctgaaa
catgtaattcgatgctacttgcgattgtctgacaatcctagggcgagagatgcacttcga
cattgcctacctgaagctcttgatgatgatacgtttggaaatcttttggagaccgacccg
tcaacgaagaagtggctcatgcacctgctctatcaattggattcaaacactccccaagtg
ggtccggggcaaccaatgtaa
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