Chondrus crispus (carragheen): CHC_T00009512001
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Entry
CHC_T00009512001 CDS
T02916
Name
(RefSeq) Cyclin-dependent kinase D-3 CDKD-3
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
ccp
Chondrus crispus (carragheen)
Pathway
ccp03022
Basal transcription factors
ccp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CHC_T00009512001
09124 Replication and repair
03420 Nucleotide excision repair
CHC_T00009512001
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ccp01001
]
CHC_T00009512001
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccp03021
]
CHC_T00009512001
03019 Messenger RNA biogenesis [BR:
ccp03019
]
CHC_T00009512001
03400 DNA repair and recombination proteins [BR:
ccp03400
]
CHC_T00009512001
Enzymes [BR:
ccp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
CHC_T00009512001
2.7.11.23 [RNA-polymerase]-subunit kinase
CHC_T00009512001
Protein kinases [BR:
ccp01001
]
Serine/threonine kinases: CMGC group
CDK family
CHC_T00009512001
Transcription machinery [BR:
ccp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CHC_T00009512001
Messenger RNA biogenesis [BR:
ccp03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
CHC_T00009512001
DNA repair and recombination proteins [BR:
ccp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CHC_T00009512001
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
ABC1
DXP_redisom_C
Haspin_kinase
Kinase-like
Motif
Other DBs
NCBI-GeneID:
17326356
NCBI-ProteinID:
XP_005718639
UniProt:
R7QKX5
LinkDB
All DBs
AA seq
362 aa
AA seq
DB search
MGVPLQGEARYRKIKVLGEGTVGIVSKARDRTRKRDDINSIVAIKKIRMGHYKDGISVTA
LREIKLLQELKHPNVIGLVDVFAGTNNVNMVIEFCVTDLELVIRDRSIALTPAEVKCCMK
MILHGIDACHEKWILHRDLKPSNILVGADGQLKIADFGLARLHASPKSRLTHQVITRWYR
PPELLYAARTYGPAVDMWSVGCIFAELMLRMPYLPGDSDIDQLAKIFQARGTPSKEDWPN
HDALPAYVEFTPTPEPDHRILFTASSPESLHLLDKMMYLDPLKRISAKEALKHPYFSLEY
PAACDAATLLAKIKSGSTVKDQGTANGNGEDSMDDSREGEQGSKPVVSETARALGGRRLD
FS
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgggggttcctcttcagggcgaagcccgctataggaagatcaaagtgctcggagaagga
actgtaggtattgtttcgaaggcacgcgaccgaacgaggaaaagagatgatattaacagc
attgtcgccattaagaagattaggatgggacactacaaggatggcatttctgtgacagcg
ttgagagagattaagcttttacaggagttgaagcatcccaatgtcattggccttgtggat
gtgttcgcgggcactaacaatgtgaacatggtaatcgagttttgcgtcacggatttagaa
cttgtcattcgtgatcgctctattgccctaactccagcagaagtgaaatgttgtatgaag
atgatcctgcacgggattgacgcctgccacgagaaatggatcctccatcgagatctcaag
cccagcaacatcctggtcggtgcagacggtcaactcaagattgctgatttcggtctcgca
cgccttcacgcatccccgaagtcccgcctcactcatcaagttatcacgaggtggtataga
ccgccggagctactctatgcagcacgtacttacggtccggcggtcgatatgtggtctgtt
gggtgcatttttgccgagctgatgctccgaatgccgtatttgcctggggattcggacatt
gaccagttagccaaaatctttcaggcgcgaggtaccccgagcaaggaggactggccaaac
catgacgctctaccggcctacgttgaattcacaccaacaccggagccggaccatagaata
ctgtttacggcttcatcaccagaatctttgcatctcctggacaaaatgatgtacctcgat
ccacttaagcgaatatctgcaaaagaagcgttgaagcatccctacttttcactcgagtac
ccggcagcatgcgacgcagctactttgcttgctaagattaaaagcggaagcacagtgaaa
gaccagggaaccgccaatgggaatggagaggattccatggatgacagtcgcgaaggcgag
cagggctcaaaaccagtcgtgagtgaaactgctcgcgctttgggaggacgacggcttgat
ttctcgtag
DBGET
integrated database retrieval system
