Chondrus crispus (carragheen): CHC_T00009542001
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Entry
CHC_T00009542001 CDS
T02916
Name
(RefSeq) box H/ACA snoRNP rRNA pseudouridine syntase component dyskerin
KO
K11131
H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
Organism
ccp
Chondrus crispus (carragheen)
Pathway
ccp03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CHC_T00009542001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccp03009
]
CHC_T00009542001
03032 DNA replication proteins [BR:
ccp03032
]
CHC_T00009542001
Ribosome biogenesis [BR:
ccp03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
CHC_T00009542001
Prokaryotic type
CHC_T00009542001
DNA replication proteins [BR:
ccp03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
Dyskerin complex
CHC_T00009542001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DKCLD
TruB_C_2
TruB_N
PUA
GAGA_bind
Motif
Other DBs
NCBI-GeneID:
17320753
NCBI-ProteinID:
XP_005713035
UniProt:
R7Q3X0
LinkDB
All DBs
AA seq
488 aa
AA seq
DB search
MGASAIDEEYIIKPESKTPALDTSKWPLLLKNYDALNVRTAHFTPIPVGCSPHKRPLHDY
VRYGVINLDKPANPSSHEVVAWIKRILKVDKTGHSGTLDPKVTGCLIVCIDRSTRLVKSQ
QGAGKEYVAVVKLHGSLGENPVTQMRRGVDLLTGALFQRPPLISAVKRQLRIRTVYQSKL
LEFDDKRNLGVFWVKCEAGTYIRTLCVHLGYLLGVGGNMQELRRIRSGVMGEDTGMYTMH
DVLDAQWVYENNRDESYLRTVIKPLESLLTGHKRVVAKDSAVNSICYGAVLMIPGLLRFE
DGIEVGEEIVIMTTKGEAVALAVAEMNTAVMATCDHGRIARIKRVVMERDTYPRKWGLGP
MASKKKGLVQQGKLDKHGRPNESTPKEWGQMQPDLSVAAAVAAVTSPVKADAPSNDAMEV
STPKTDAGEATPGDKVENATTPDTSEKKRKKDKSDKKKKKKKKEKDGSESEKKKKKKKRK
EKAAEDSD
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgggagcctcagcgatcgacgaggagtacatcatcaagccagagtcgaaaacccctgcc
ctggacacctcaaaatggcctctccttcttaagaactacgacgctctcaacgtccgtact
gcccatttcacgcctatcccggtgggctgctcgccgcacaagcgcccgctgcatgactac
gtgcgttacggcgtgatcaacttagacaagcctgcgaacccgtcttcgcacgaagtcgtc
gcctggattaaacgtatcctcaaggtcgataagacgggccactccggcacgctggatcca
aaagttaccggctgcctcatcgtctgcatcgaccgctccacccgtctggtgaagagccag
cagggcgccggtaaggagtatgtcgccgtcgtgaagctgcacggaagcctgggcgagaac
cccgtcacgcagatgaggaggggcgtcgacttgcttaccggcgccctgttccagaggccc
ccgcttatttccgccgtgaagaggcagctgaggatccgcaccgtgtatcagagtaagctg
ttggagtttgacgataagaggaatctcggcgtgttctgggtcaagtgcgaagcagggaca
tacatccgtaccctctgcgtgcacctgggctacttgctgggcgtaggaggtaacatgcag
gagctgcgacgcattaggagtggcgtcatgggagaggacacgggtatgtacaccatgcat
gacgttctagatgcgcaatgggtgtacgagaacaaccgcgacgagtcatatttgcgcacg
gtcatcaaaccattggagtccctcctcacaggacacaaacgagtcgtcgccaaggactcc
gccgtcaactcgatttgctacggcgccgtgctcatgattcccggcttgctaaggttcgag
gatggcatcgaggttggtgaggaaattgtcatcatgaccacaaagggagaagccgttgcc
cttgccgttgcggagatgaatacggctgtcatggcaacatgcgatcacggaaggatcgct
cgcatcaagcgcgtcgtcatggaaagggatacgtaccccaggaaatgggggctgggccct
atggcatcgaaaaagaagggccttgttcaacaaggaaagctggacaagcacggccgcccg
aacgaaagcacaccaaaggaatggggtcagatgcaaccggacttaagtgtggccgcagct
gtggctgctgtcacatcccctgtgaaggccgatgcaccaagtaatgatgctatggaagtc
tccacacccaagacggacgctggggaagcgactccgggtgataaggtcgagaacgcgacc
acaccggacacgtccgaaaagaagagaaagaaggacaagtcggataagaagaagaagaag
aagaaaaaggaaaaggatggtagcgagtcggagaagaaaaagaagaagaagaagcgaaag
gaaaaggcagcggaggattcagattag
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