Chondrus crispus (carragheen): CHC_T00010010001 Help Entry CHC_T00010010001  CDS       T02916                                  Name (RefSeq) DNA-directed RNA polymerase   KO K03010   DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6] Organism ccp  Chondrus crispus (carragheen) Pathway ccp03020   RNA polymerase ccp03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:ccp00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     CHC_T00010010001   09124 Replication and repair    03420 Nucleotide excision repair     CHC_T00010010001  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:ccp03021]     CHC_T00010010001    03400 DNA repair and recombination proteins [BR:ccp03400]     CHC_T00010010001 Enzymes [BR:ccp01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      CHC_T00010010001 Transcription machinery [BR:ccp03021]  Eukaryotic type   RNA polymerase II system    RNA polymerase II     Core subunits      CHC_T00010010001 DNA repair and recombination proteins [BR:ccp03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase II complex       CHC_T00010010001 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_2 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_5 Motif Other DBs NCBI-GeneID:  17325756 NCBI-ProteinID:  XP_005718001 UniProt:  R7QHY8 LinkDB All DBs AA seq 1140 aa AA seqDB search MYEDQHLPGRVRDEEEEMDKKVIINFGQLKMGRPIYQESTGDTHLLYPNQARLRNLTYSA PLYCETKVSTVTIIDPETGEEDVSHEPSKPVFMGRVPIMLRSRYCLLDPLKNDFGLNQMG ECHVDQGGYFVINGSEKVLLAQERMSGNHVFVFVKKAPTKFSHIAEVRSVADTSSGPASQ LQVKLSSRSGSKGGVTGQTILTTLPNITQDIPIVIVFRALGFQNDKEVMKHICYDFNDDE LMTSLMPSIEEAQVIQDQEVALDFIAKRGPQQSATAPKKHRIKYARELLQLEFLPHISTQ PNSELKKGYYLGYMVNKMLHVALGRQPPDDRDHYGNKRLDLAGPLMAGLFRQQLRKLMKD VRANAKRIVNAGQDIDLSSIVKSAIITNGLKYALATGNWIGAGGQPTKTGVSQVLNRLTF ASSLSHLRRLNSPIGREGKLAKPRQLHNTHWGMICPAETPEGQSCGLVKNLALMAYISVG SLSRPVTLFLEEWSTHSLLEINAGQVAKATKVFVNGAWFGIHHRADHLAETLRRLRRKGD IHFEVSIVMDHQRKELRIYTDAGRICRPLFIVEQDRVPNAAGWRQPRLKIRKKHVQVLMN AQDADDETFGFNALINLGLIEYVDCEEEETIMIAMLMSDLEKKDHSAGYTHCEIHPAMIL GVCGSIIPFPDHNQSPRNTYQSAMGKQAMGVYITNYSLRMDTQAHVLYYPQKPLVCTRAM EHLKFRALPSGINACVAIACYSGYNQEDSVIMSQSGIDRGLFRSVYFRSYKEEENRKYGD VKESFEVPDRKTCLSMKPDDYSLLEEDGLVPEGVAITGRTILVGKVQPMEEVEQDENGGG TRSMTEMAGGKVKKCVSLGAKSTEKGIVDKVLLATNEEGHRFTRVRLRSVRKPQIGDKFS SRHGQKGTVGITYRQEDMPFTSEGIIPDIIVNPHAIPSRMTIGQLIECLLGKVSSIRGTE GDATPFTKGTVEDIAQRLLENGYQPHGWELMHNGHTGRPLEAQIFLGPTYYQRLKHMVDD KIHSRARGPSTMLTRQPLEGRARGGGLRFGEMERDCLISHGGANFIQERLMEMSDKSRVH VCDICGLIAIADLTKNVFQCRGCNNKTRISQVYIPYACKLLFQELMAMAIAPRIMVKVED NT seq 3423 nt NT seq  +upstreamnt  +downstreamnt atgtacgaggatcaacatctgcccggacgtgtccgcgatgaggaggaagaaatggacaaa aaggtcataatcaactttggtcagctgaagatgggacggcctatctaccaagagtctact ggtgatacccatctgctgtacccaaatcaggctcgcctgcggaatctgacgtattcagcg ccgctgtattgcgagaccaaagtcagcacagtcactataatcgaccctgaaactggggaa gaagatgtctcccacgagcctagcaagcctgtttttatgggccgtgttcctattatgctg cggtctagatactgtctcctagatcccctgaagaatgacttcggccttaatcaaatgggt gagtgtcacgttgaccaaggcggttactttgtcatcaacggctcggagaaagtcctgttg gcacaagagcgcatgtcaggcaaccatgttttcgtctttgtcaaaaaggcgccaactaaa ttttcacacattgctgaagtgcgctccgttgcggataccagcagcggacccgcctcacag ctacaggtaaagctgtcttcccgatctggttcgaaaggcggggtaacgggacagacaatc ttaaccacactaccgaatatcactcaggatattcctattgtcatagtatttcgggcactt ggttttcagaatgacaaggaagtcatgaaacatatatgctacgatttcaacgatgacgaa ttaatgacgtccctgatgccgtcgattgaagaagctcaggtcatccaagaccaggaggta gccctggattttatcgcgaagcgaggaccgcaacaaagcgcgactgcaccgaagaagcat cgcattaagtatgccagggaactattgcagctcgaatttctacctcacatcagcactcag ccaaactcagaactgaaaaagggctactatctgggttacatggtgaacaaaatgttgcat gttgctctcggaagacagccaccagatgatcgcgaccattatgggaacaagcggctggac ctagccggtcccttgatggccgggctctttcgacagcagctcagaaagctgatgaaagat gttcgagcaaatgcgaaaagaatcgtaaacgccggtcaggacattgatctaagttccatt gtgaagtcggctatcattaccaacggcttgaagtatgcgctggcaactggaaactggatt ggagcaggtggtcagccgacaaagactggagtgtcgcaagtgctcaatcgtctaacgttt gcctcctcactctcacatctgagaagactcaactctcctatcgggcgagagggcaaactg gccaaacccaggcagcttcacaacactcactggggcatgatttgtccggcggaaacccca gagggtcagtcctgtgggcttgtgaaaaatctagctctgatggcgtacatatcagtaggg tccctctcacgcccggtcacacttttcttggaagaatggagtactcactctttgctggaa atcaatgcaggtcaggtggctaaggcgacgaaggtgttcgttaatggcgcgtggtttgga attcatcatcgagcggatcatcttgctgagactctgcgtcgattacggcgaaaaggagac attcactttgaagtttccattgttatggatcatcagcggaaagagcttcgcatttacacg gatgcaggacgaatctgtaggccactgttcattgtggaacaagatcgtgttccaaacgcg gcaggttggcgtcaaccgcgtttgaagatccgaaaaaagcatgttcaagtgttgatgaat gcgcaggacgcggacgacgaaactttcggattcaatgctttgataaatcttggcctcatc gaatatgtggattgcgaagaggaagagacgatcatgattgcaatgttgatgagcgacctg gagaagaaggatcattcggctggctacacccattgtgagattcacccagcgatgatttta ggtgtttgtggttcgatcattccgttcccggatcacaaccaaagtcctcgaaacacgtat cagtcggcaatggggaagcaagcaatgggtgtatatatcacaaactacagcttgcgcatg gatactcaggcccacgtcctgtattaccctcaaaaaccactcgtatgcactcgcgcaatg gaacacttgaagttccgcgcattgccttctggaatcaatgcctgtgttgcgattgcttgt tactctggttacaaccaagaagattctgttatcatgtcacaatcaggaattgatcgggga ctgtttcgatcagtgtatttcaggagttacaaggaagaggagaataggaaatatggagat gtgaaggagtcatttgaagttcctgataggaagacgtgcttgtcaatgaagccggatgat tattctttgcttgaggaagatgggttggtcccagaaggagtagctatcaccgggcggacg attcttgttgggaaagttcaaccaatggaggaagtggagcaagacgagaacggtggtggt actcgcagtatgacggaaatggccggggggaaggtgaagaaatgcgtatccctgggagcg aaatcgacggagaagggcattgtggacaaagttcttcttgcgacgaatgaagaagggcac cgtttcacaagggtgcgactacggtccgtgagaaagccgcaaattggtgacaagttttca tcgcggcatgggcaaaaaggtacggttgggatcacgtacagacaggaagacatgcccttc acatccgagggcatcatcccagacatcattgtgaaccctcacgccattccgtctcgaatg acgattggtcaactgattgagtgtctgttgggcaaggtttcatccatccgaggaacagaa ggggacgcaacgccttttacaaaaggtacagtggaagatatcgcacaacgtctgctcgaa aacggttatcagcctcatgggtgggaactgatgcacaacgggcacacaggtcgaccactg gaggcgcagattttcctagggccaacttactaccaaaggctgaagcatatggttgatgac aagatccattcgcgagccagagggccaagcactatgcttacacgtcagccactagagggt cgagcacgtggtggtggtctaagatttggagaaatggagcgtgattgcctgatttcacac ggcggtgccaacttcatccaggagcggttgatggaaatgagcgacaaatcgagggttcat gtatgcgacatctgtggattaattgcgattgcagacctcaccaaaaatgtatttcaatgt cgggggtgtaacaacaagacgcgcattagtcaggtgtacatcccgtatgcgtgcaagctg ttgttccaagagttaatggccatggcaattgctccgcgcatcatggtgaaggtagaggat tga

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