Chondrus crispus (carragheen): CHC_T00010012001
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Entry
CHC_T00010012001 CDS
T02916
Name
(RefSeq) exosome component 6 Mtr3
KO
K12587
exosome complex component MTR3
Organism
ccp
Chondrus crispus (carragheen)
Pathway
ccp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CHC_T00010012001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccp03019
]
CHC_T00010012001
Messenger RNA biogenesis [BR:
ccp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
CHC_T00010012001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
UreF
DUF6511
Motif
Other DBs
NCBI-GeneID:
17318631
NCBI-ProteinID:
XP_005710910
UniProt:
R7QSX7
LinkDB
All DBs
AA seq
264 aa
AA seq
DB search
MRYGPLCRVTAAPKPKTSEAHKRSDGRTGWEELRPVFLKASFLSSAAGSAYFEAGGTKVF
CAVHGPRAWASSSIDAVVHCEVRWAHFSGRREETRTAAGGERSRPSESATDEERELGASL
ARTLGTVTRVEMYPKSRIEVSALVLEDDGSSFAAVVTAAALAMADAGIEMADLTAAMTAA
VVDGNVVVDPNAEEERRASGTVMVAYMGNVGKVTDLVQTGEMEIGQLAHAIQTGCQAATQ
VRGLIKACLEKQAGKVLKKRGRGA
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgagatacggaccgctgtgccgcgtgacggccgcgccgaaacccaagacaagcgaggca
cacaagcgcagcgacgggcgcacgggttgggaagagctgcggccagttttcctaaaggcg
tcattcttgtcctccgcggccggttcggcctacttcgaagccggaggcacaaaagtgttc
tgtgcggtgcacggcccacgcgcgtgggcgagctcgtcgatcgacgcagtagtgcactgc
gaggtgcgatgggcgcacttctcggggcggcgcgaggagacgcggaccgcggcggggggc
gagcggtcgcggccgagcgagtccgcaacggacgaggagcgcgagctgggcgcgtcgctc
gcccgcacgctaggcacggtgacgcgcgtggagatgtaccccaagtcgcgcatcgaggtg
agcgcgctggtgctggaggacgatgggagctcgttcgcggccgtggtgacggcggctgcg
ctggcgatggccgacgccggcatcgagatggccgacttgaccgccgcgatgaccgctgcc
gttgtcgacggcaacgtcgtggtcgatcccaacgcggaagaggagcggcgcgcgtcgggc
acggtcatggtggcgtacatgggaaacgtcggaaaggtgacggacctcgtgcagacgggc
gagatggagatcgggcagttggcgcacgcgatccagaccgggtgccaggcggcgacgcag
gtgcgcgggctgatcaaggcgtgcttggaaaagcaggcgggcaaggtgctgaagaaacgc
gggcgcggggcgtag
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integrated database retrieval system