KEGG   Chondrus crispus (carragheen): CHC_T00010026001
Entry
CHC_T00010026001  CDS       T02916                                 
Name
(RefSeq) DBR1 Domain containing gene
  KO
K18328  lariat debranching enzyme [EC:3.1.-.-]
Organism
ccp  Chondrus crispus (carragheen)
Brite
KEGG Orthology (KO) [BR:ccp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ccp03041]
    CHC_T00010026001
   03009 Ribosome biogenesis [BR:ccp03009]
    CHC_T00010026001
Spliceosome [BR:ccp03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   Other SAPs
    CHC_T00010026001
Ribosome biogenesis [BR:ccp03009]
 Eukaryotic type
  90S particles
   RNase
    CHC_T00010026001
SSDB
Motif
Pfam: DBR1 Metallophos Metallophos_2
Other DBs
NCBI-GeneID: 17322272
NCBI-ProteinID: XP_005714559
UniProt: R7QB95
LinkDB
AA seq 505 aa
MKVAVVGCAHGELDAIYAALAEAEAARGVRADVLLCAGDFQAVRNAADLASMACPPRFRD
MRSFWRYYAGDARAPLPTLFVGGNHEASTHLQEIPLGGLVAPNIYFLGNAGVVNFRGLRI
AGVSGVYTEHNFHKHRFESPPYPRSQIKSVYHARREDVDRLLRLRAPVDVFLSHDWPRGI
TDFGDLAALLRAKPFLKGEIADGSFGNPASRKVLDALAPSFWFAAHIHVKFPALVHHDSG
KTTRFLALDKALPKRDFIQILDIPRADGEAEAEAESAIELDPEWLTILRTEAEQRGRQTP
VSEEEMHATVQKMQASGVKPFLSPINDFERRAAMHDPKGRGTVEQGQVVLQKENKSIMAA
LGLPEDAWLAKQQIAQVNGAQAAPVTPYLVSLLFSPTASSPKTSSTKLQTTKDSATAFGA
MLYSTLGYSTVVRFVITAAYFVFIFFAITTRGTAPSSFPPPHPFDPVSNRPAQHHTPLPT
STSPPHQHHTYRTLAKLHAFRSSLP
NT seq 1518 nt   +upstreamnt  +downstreamnt
atgaaagtcgcggtcgtgggctgcgcgcacggcgagctggacgccatctacgccgcgctg
gccgaggccgaggccgcgcgcggcgtgcgcgccgacgtcctgctgtgcgccggcgacttc
caggccgtgcgcaacgccgccgacctcgccagcatggcgtgcccgccgcgcttccgcgac
atgcgctcgttctggcgctactacgcgggcgacgcccgcgccccgctccccaccctcttc
gtcggcggcaaccacgaggcctccacccacctgcaggagatcccgctcggcggcctcgtc
gccccgaacatctacttcctgggcaacgccggcgtcgtcaacttccgcggcctgcgcatc
gccggcgtcagcggcgtttacaccgagcataactttcacaagcaccgcttcgaaagcccg
ccgtacccgcgcagccagatcaagagcgtgtaccacgcgcgccgggaggatgtcgaccgc
ttgctacgcctgcgcgccccggtcgatgtcttcctgagccacgactggccgcgcggtatt
accgactttggcgaccttgccgcgctgctgcgagcaaagccgttcctcaagggcgagatc
gcggacggctcgtttggcaaccccgcgtcgagaaaagtcctcgacgccctcgccccgagc
ttctggttcgccgcccacatccacgtcaagtttcccgccctcgtccaccacgacagcggg
aaaaccacgcgcttcctcgcgctggacaaggccctcccgaaacgcgactttattcagatc
ctggacatcccccgtgcggacggggaggcggaggcagaggcagagtctgccatcgagctc
gaccccgagtggctcaccatcctgcgcaccgaggccgagcagaggggcaggcagactccg
gtttcggaagaggagatgcacgccactgtgcagaagatgcaggccagcggagtcaagccg
ttcctctcgccgatcaacgactttgagcggcgcgccgccatgcatgatccgaagggcagg
ggcacagttgagcagggccaagtcgtgctgcagaaggagaataagagcatcatggccgcg
ctcgggttgcccgaggacgcatggcttgcaaagcagcaaatcgctcaagtaaacggcgcg
caggcagcaccagtcacaccgtatttagtatccttgctcttctcgcccaccgcaagctct
ccgaaaacgtcgagcacaaaactgcagaccacaaaagattcggccacagcttttggcgca
atgttgtacagtacccttgggtacagtactgtagtgcgctttgtcattactgcagcgtat
tttgttttcattttcttcgcaatcacaacacgtggaacggccccttcctctttcccgccc
ccgcacccctttgatccggtgagcaaccgccctgctcaacaccatactcccttgccaacc
tctacatcaccaccccaccagcatcatacgtaccgcacactggcaaaactccacgctttt
cgaagctcccttccctga

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