Chondrus crispus (carragheen): CHC_T00010026001
Help
Entry
CHC_T00010026001 CDS
T02916
Name
(RefSeq) DBR1 Domain containing gene
KO
K18328
lariat debranching enzyme [EC:3.1.-.-]
Organism
ccp
Chondrus crispus (carragheen)
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccp03041
]
CHC_T00010026001
03009 Ribosome biogenesis [BR:
ccp03009
]
CHC_T00010026001
Spliceosome [BR:
ccp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
CHC_T00010026001
Ribosome biogenesis [BR:
ccp03009
]
Eukaryotic type
90S particles
RNase
CHC_T00010026001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DBR1
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-GeneID:
17322272
NCBI-ProteinID:
XP_005714559
UniProt:
R7QB95
LinkDB
All DBs
AA seq
505 aa
AA seq
DB search
MKVAVVGCAHGELDAIYAALAEAEAARGVRADVLLCAGDFQAVRNAADLASMACPPRFRD
MRSFWRYYAGDARAPLPTLFVGGNHEASTHLQEIPLGGLVAPNIYFLGNAGVVNFRGLRI
AGVSGVYTEHNFHKHRFESPPYPRSQIKSVYHARREDVDRLLRLRAPVDVFLSHDWPRGI
TDFGDLAALLRAKPFLKGEIADGSFGNPASRKVLDALAPSFWFAAHIHVKFPALVHHDSG
KTTRFLALDKALPKRDFIQILDIPRADGEAEAEAESAIELDPEWLTILRTEAEQRGRQTP
VSEEEMHATVQKMQASGVKPFLSPINDFERRAAMHDPKGRGTVEQGQVVLQKENKSIMAA
LGLPEDAWLAKQQIAQVNGAQAAPVTPYLVSLLFSPTASSPKTSSTKLQTTKDSATAFGA
MLYSTLGYSTVVRFVITAAYFVFIFFAITTRGTAPSSFPPPHPFDPVSNRPAQHHTPLPT
STSPPHQHHTYRTLAKLHAFRSSLP
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtcgcggtcgtgggctgcgcgcacggcgagctggacgccatctacgccgcgctg
gccgaggccgaggccgcgcgcggcgtgcgcgccgacgtcctgctgtgcgccggcgacttc
caggccgtgcgcaacgccgccgacctcgccagcatggcgtgcccgccgcgcttccgcgac
atgcgctcgttctggcgctactacgcgggcgacgcccgcgccccgctccccaccctcttc
gtcggcggcaaccacgaggcctccacccacctgcaggagatcccgctcggcggcctcgtc
gccccgaacatctacttcctgggcaacgccggcgtcgtcaacttccgcggcctgcgcatc
gccggcgtcagcggcgtttacaccgagcataactttcacaagcaccgcttcgaaagcccg
ccgtacccgcgcagccagatcaagagcgtgtaccacgcgcgccgggaggatgtcgaccgc
ttgctacgcctgcgcgccccggtcgatgtcttcctgagccacgactggccgcgcggtatt
accgactttggcgaccttgccgcgctgctgcgagcaaagccgttcctcaagggcgagatc
gcggacggctcgtttggcaaccccgcgtcgagaaaagtcctcgacgccctcgccccgagc
ttctggttcgccgcccacatccacgtcaagtttcccgccctcgtccaccacgacagcggg
aaaaccacgcgcttcctcgcgctggacaaggccctcccgaaacgcgactttattcagatc
ctggacatcccccgtgcggacggggaggcggaggcagaggcagagtctgccatcgagctc
gaccccgagtggctcaccatcctgcgcaccgaggccgagcagaggggcaggcagactccg
gtttcggaagaggagatgcacgccactgtgcagaagatgcaggccagcggagtcaagccg
ttcctctcgccgatcaacgactttgagcggcgcgccgccatgcatgatccgaagggcagg
ggcacagttgagcagggccaagtcgtgctgcagaaggagaataagagcatcatggccgcg
ctcgggttgcccgaggacgcatggcttgcaaagcagcaaatcgctcaagtaaacggcgcg
caggcagcaccagtcacaccgtatttagtatccttgctcttctcgcccaccgcaagctct
ccgaaaacgtcgagcacaaaactgcagaccacaaaagattcggccacagcttttggcgca
atgttgtacagtacccttgggtacagtactgtagtgcgctttgtcattactgcagcgtat
tttgttttcattttcttcgcaatcacaacacgtggaacggccccttcctctttcccgccc
ccgcacccctttgatccggtgagcaaccgccctgctcaacaccatactcccttgccaacc
tctacatcaccaccccaccagcatcatacgtaccgcacactggcaaaactccacgctttt
cgaagctcccttccctga
DBGET
integrated database retrieval system