Chondrus crispus (carragheen): CHC_T00010075001
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Entry
CHC_T00010075001 CDS
T02916
Name
(RefSeq) Histone demethylases (LSD1 homologs)
Organism
ccp
Chondrus crispus (carragheen)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
Pyr_redox_2
2-Hacid_dh_C
Thi4
HI0933_like
FAD_binding_3
NAD_binding_9
SWIRM
Pyr_redox
AlaDh_PNT_C
FAD_binding_2
MurD-like_N
FAD_oxidored
KARI_N
Motif
Other DBs
NCBI-GeneID:
17322069
NCBI-ProteinID:
XP_005714352
UniProt:
R7Q9U6
LinkDB
All DBs
AA seq
770 aa
AA seq
DB search
MRNNYERYCNDFDDVLVSLLETTYAQISLLSPSHRWFLERCEQSLLPSGFSSALRDRANT
FKQSKSVDPDAQEEQTFLRFPETTQAVIRARLSENSLEPAQANHPLFQSKEPPLVLVDLR
NHIIRMWYRDTRARMGVASALADVPKRFRMLGCRIFTHLECTGIINFGAIPLTSAVGSQR
GNKAACKTVAIVGAGMAGLVTARQLQAFGFQVRIFEARKRPGGRVHAERDKFSVSVDMGA
MLITGILQNPVAVLAHQTDSPLHFLDSECPLFDIDGSWVPKETDAWAEREFNRILDDTGR
FRDKEGCSEVAKRLSLGEAFQMALEKRVRRRKARVRAANGEGDRGALRTLHRKTARRCDS
SGEEDDSEYLNIPLNNSRDPANLLVSNSVPTHHADGGSSCLGVIEPPKNSERPRKRSKVV
NGNAKSQVGRPAVEARAPFRNGHSEKKFQSMDEKVACRLLRWHIANLEYGCAADISKVSL
LHWDQDDPYGFSGEHVLLKQGYDPLINGLVDGLGDMLELRSEVSAIDYSEENGSVLVEVE
NHRGYVEEHEFDFVVVTVPLGVLKKRTIEFRPTLPSKKLAAINRLGFGGLMKVAMEFNSQ
FWVKHDMFGALRETVEKRGEFYFFWNLAPCTKKPVLMTLVVEPCVQAMESLSDHEIVDRA
VRVLRRCYPDAPNPKAFSVSRWSKDEFSGGVYTNIPVGSSGADYDIIEAPVDRRVFFGGE
HTTRQYPTTCASAIISGLREAYRIVEENELTEVFAALHLQSLRESGLTAT
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaacaactacgagcgctactgcaacgatttcgacgacgttctagtatcacttcta
gaaacaacatatgcccagataagtcttttaagtcctagtcatagatggtttttggagcgg
tgtgaacaaagcctgctaccgtctggcttctcgagtgccttaagagacagagcaaatacc
ttcaaacagtcaaagagcgtcgacccagacgcacaagaagaacaaactttcctgcgcttc
ccagaaactacgcaagcagtgatccgagcccgtctgagcgagaactctctggagcctgct
caagcaaatcatccgctttttcaatctaaggaacctcctctggttctcgtagaccttcgc
aatcatataatccggatgtggtaccgggacacccgtgcaagaatgggagtagcaagcgca
ttagcagatgtgccgaaacgtttccgtatgctaggatgtcgaattttcactcacttagaa
tgcacggggataattaatttcggagcaattcctctgacatcagccgttggttctcagaga
gggaacaaagctgcatgcaaaactgttgctatcgttggggctgggatggcaggtttagta
acagcacggcagttacaggcatttggatttcaagtgagaatatttgaagcccgaaagcgc
ccgggaggccgtgtgcatgccgagagggacaagttctccgtaagcgtcgacatgggtgct
atgcttattactgggatccttcaaaatcctgtcgcagttctcgcccaccaaacagattcc
ccattgcatttcctggattccgagtgtcctctttttgatatcgacggtagctgggttccc
aaagagactgatgcatgggccgagagggagttcaatcgtattttagatgacacaggtcgt
ttcagggacaaagagggttgctctgaggtagctaagagactgtcattgggtgaagccttt
caaatggcgttagaaaagcgagttcgtcgcagaaaggccagagtgagggctgcgaacggc
gaaggggatcggggtgcattaaggaccttgcacagaaagacagcacgtcgttgtgatagt
agtggtgaggaggatgacagtgaatacttgaatattccattgaacaattcaagagatcca
gcaaacttactagtatctaatagtgtaccaacccaccacgcggatggtggttcaagttgt
ttgggggtaattgagccgccaaagaactcagagcggccaagaaagaggtcgaaagtggtt
aatggtaatgccaaatcgcaggttgggcgccccgcggtggaagcacgagcaccatttcga
aatgggcattctgagaaaaagttccagtcaatggacgagaaggtggcatgtcgcctttta
cggtggcacatagcaaacctcgagtacggatgtgccgcagacataagcaaagtgagtttg
ttacactgggatcaggatgatccatacgggttttcaggtgaacacgttctcttaaagcaa
ggttatgatccactcattaatggtttggtcgacgggcttggggatatgctggagttgaga
tcagaggtatcagcaattgattactctgaagagaacggatctgtactggttgaagtggaa
aaccatcgtggttacgttgaagaacatgaatttgattttgtcgtggttaccgtgccatta
ggggtactcaagaaacgtactatcgaatttagaccaacccttccctcaaagaaactcgca
gctatcaatcgccttggtttcggaggtctcatgaaggtagcgatggaattcaacagccag
ttctgggtgaagcatgacatgttcggggcactgcgagaaacggtagagaagagaggagag
ttttatttcttttggaacttggctccatgtacgaagaaaccggtattaatgacccttgta
gttgaaccttgtgtacaggcaatggaaagtctgtcagaccacgagattgttgatagagct
gtccgagtcctgcggcgatgctatcccgacgctcctaacccaaaagcattctcagtttca
cgttggtctaaggatgagttttcagggggagtgtacactaacattccagtaggatcaagt
ggtgctgattatgacattattgaagctcctgtagaccggcgagtgttctttggtggcgaa
catactactcggcaatatccaactacatgcgcgtccgcaatcatcagtgggcttcgcgaa
gcatacagaattgtagaagaaaatgagttgactgaggtttttgctgcccttcatctccaa
tcccttcgagaaagcggactgaccgcaacatag
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