Chondrus crispus (carragheen): CHC_T00010100001
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Entry
CHC_T00010100001 CDS
T02916
Name
(RefSeq) Peptidyl-prolyl cis-trans isomerase
KO
K09567
peptidyl-prolyl isomerase H (cyclophilin H) [EC:
5.2.1.8
]
Organism
ccp
Chondrus crispus (carragheen)
Pathway
ccp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CHC_T00010100001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccp03041
]
CHC_T00010100001
03110 Chaperones and folding catalysts [BR:
ccp03110
]
CHC_T00010100001
Enzymes [BR:
ccp01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
CHC_T00010100001
Spliceosome [BR:
ccp03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
CHC_T00010100001
Chaperones and folding catalysts [BR:
ccp03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
CHC_T00010100001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pro_isomerase
Motif
Other DBs
NCBI-GeneID:
17321294
NCBI-ProteinID:
XP_005713578
UniProt:
R7Q7E9
LinkDB
All DBs
AA seq
190 aa
AA seq
DB search
MAVPVGDPTDALRHHEDENPIVFLDVSFGQREIGRITLELFADVCPRTAENFRQFCTGEY
RKDNKPIGYKGATFHRIIKDFMVQGGDFLNKDGTGCTSIYGEAPFADESLGALRHSGPGV
LAMANTGPNTNGSQFYITCTKCDFLDGKHVVFGKVINQESLLVVRKLEGIPVGQNNRPTV
ECTITECGEM
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atggcagtaccggtcggcgatccaacggatgcactccgccatcacgaagacgaaaacccc
atcgtctttctcgatgtcagcttcggacaaagagagatcgggcgcataactcttgaactt
ttcgctgatgtctgtccgcgtacggcagaaaacttccgccaattctgcaccggagagtac
cgcaaggacaacaaacctattggatacaagggggccacattccatcgaatcatcaaagat
ttcatggttcagggtggtgacttcttgaacaaggatggcaccgggtgtacgtccatctac
ggtgaagcgccttttgcagacgagtctttaggggcattgcgacattcaggacctggcgtc
ttggctatggcaaatacagggcccaacacaaacggaagtcagttttacattacttgcaca
aagtgcgacttcctcgatggaaagcatgtggtgttcggcaaagttataaaccaagagtcc
ctcctggttgtaagaaagcttgagggtatcccagttgggcagaacaatcgcccgacggtg
gaatgtactatcacggaatgcggagaaatgtga
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