Chondrus crispus (carragheen): CHC_T00010169001
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Entry
CHC_T00010169001 CDS
T02916
Name
(RefSeq) DNA mismatch repair protein MLH1
KO
K08734
DNA mismatch repair protein MLH1
Organism
ccp
Chondrus crispus (carragheen)
Pathway
ccp03430
Mismatch repair
ccp03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CHC_T00010169001
03460 Fanconi anemia pathway
CHC_T00010169001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccp03400
]
CHC_T00010169001
DNA repair and recombination proteins [BR:
ccp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
CHC_T00010169001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
3HCDH_N
Motif
Other DBs
NCBI-GeneID:
17322826
NCBI-ProteinID:
XP_005715086
UniProt:
R7Q9P7
LinkDB
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AA seq
845 aa
AA seq
DB search
MEEESAHGLTSPHETCRIRRLPEGVINRIAAGEVVVRPSAALKELLENSLDAGASSITIT
VRNGGLKLLQVCDDGKGVSKEDLPLLCQRFATSKLRTFEDLAAVSTFGFRGEALASISHV
ARLSLLTKTKDSDVAYKATYLDGVLRGEPEPTAGCDGTTMIIEDMFYNLVARRNALKSPS
DEYRAVVDVVSRYAIRYPQVSFLCSTVSDNIRAGFGSSVANELLSFEVKIYPAKATVSVY
TTTANFSMKKAVFVLFINGRLIECQPLKRAVLATYGSFLPKNGHPFVYVDLKMRQADIDV
NVHPTKKEVRFLNEQLIVEAVVDKLIEKLKTTETSRTFLAQSILATNGSGIQAEPPITSS
SPRVRDWDSEEKLRVRQSNSHNLSFASQDIKIFDELTEKSGALDELPEPGESLPQNDASQ
SLRDSEGSPFERMDLTTPGNHTETRGPGKKSTSSSKSNIMHAKNKVRTGADAPVGLYDVY
LSRNNQFSKAIDIQTWRKRRKRALPLLTSVENMLNECQSKSHSGLTQALKEHIFIGVASD
NFVLLQHSTKLLLAEIGPIVAELMYQQILIRFADLDTLSLSPPAPLVRLIEGYTGGKGKS
EVHETADYCSKMLMDKAPMLSEYFGISISKDGEGEVEIHTIPLLFPKVMPDVKYFGAFLY
HLAVDTNWCEEFECLQGISRAIAEWYGRHWDFGSFQGDETMGSYDENREQNVEGNLANAK
PKTSAETVDTSREWLLRHIFFASLRKDFYPPQSFYTEKIVREITSTARLYKDDRTCSRGR
KRDVRRYAMERVNDACARNSHCLLPWTCVIDTGPHARWRLFLKNNWPKDSGPLVSEHNEQ
NEGRL
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagaaagcgctcacggcctgacaagtcctcatgaaacttgtcgaatccgtcgc
cttcccgagggcgttatcaatcgcatcgcagccggcgaagtagttgtccgcccttcagca
gcactgaaggagctcttggaaaacagtctagatgcaggcgcatcttcaatcaccataaca
gtccgaaacggtgggctcaaactgttgcaagtctgtgatgatgggaaaggtgtgtcgaaa
gaggatttgccattgctgtgccaacggtttgccacttccaagctgcgcaccttcgaagac
ttggccgctgtttctacctttggattccggggcgaggctctcgcctccatttcgcatgtc
gcaaggctttccctcctcaccaaaacgaaagactccgatgttgcgtacaaagccacgtat
ttagacggcgtacttcgaggtgagccagagcctactgcggggtgcgatggcaccaccatg
attattgaggatatgttttacaacctcgtcgctcgtaggaatgcgctcaaatcgccctca
gatgagtaccgcgctgttgtggacgtcgtctccaggtacgctattcggtacccgcaagtg
tcgtttttatgttcgaccgtgtcggacaacatccgagcagggttcggctcttctgtcgca
aacgaactattatcatttgaagtcaaaatttatccagcgaaggcaacggtttcggtctat
accacaacggctaactttagcatgaagaaggctgttttcgttctgttcattaacgggcgt
cttattgaatgtcagccccttaaaagagctgtactcgcaacatatggcagctttctcccg
aagaatggacacccttttgtgtatgtcgatctgaagatgcgacaggcagatattgacgtt
aacgttcatccgaccaagaaagaagtacgatttttgaatgaacaactcatagttgaagct
gtcgtcgacaagctgattgaaaagctgaagacaacagagacatcgcgaactttcttagct
caatccatacttgccacgaatgggtccggaattcaggctgagccgccaatcactagttct
tctcccagagtacgggactgggactcagaggagaaactaagggtgcgacagtcaaactct
cataatttaagttttgcttcacaagacatcaaaatttttgacgagctcactgagaaaagc
ggggctctcgacgaacttcctgagccgggagaatcattgccacaaaacgatgcatctcag
tcactccgtgactcagaagggtctccgtttgaacggatggatttgactactcccggtaat
cacactgagacgaggggtcctgggaaaaagagtacctcttcttcgaagagcaatattatg
cacgccaagaacaaagtacggacgggagccgacgcccctgtcgggctttacgatgtatat
ctcagtcgcaacaatcaattttctaaagctattgatattcaaacctggcggaagcgacga
aagcgtgcattgccgctgcttacatccgttgaaaatatgttgaatgaatgtcaaagcaag
tcgcacagcggcctaacgcaagctctgaaagagcacatatttatcggcgttgcttcggac
aactttgttttgttgcagcattcgacaaagcttttgcttgcagaaatagggccgattgtt
gcggagctcatgtatcaacaaatcctaattcggtttgcagaccttgacaccctatccctt
tcgccccctgctccgctggtgagattaatcgaaggatacactggcgggaagggcaagtcg
gaagtacatgagactgctgactactgttcgaaaatgttgatggacaaggcccctatgctc
tcagaatattttgggatttcaatttccaaagacggcgaaggtgaagttgagattcacact
atccctcttttgtttcccaaagtcatgcccgatgtaaagtatttcggggcatttttgtac
catttggctgtggatacaaattggtgtgaggagtttgagtgcctccagggaatttctagg
gcaatagcagagtggtatggaaggcattgggattttgggtctttccaaggtgacgagacg
atgggctcgtatgacgagaaccgagaacaaaacgttgaggggaatttggcgaatgcaaag
ccaaaaactagcgcagagactgtggatacaagccgagagtggctgctacggcatattttc
tttgcgtcattgcgaaaggacttttatccaccgcagagcttttacacggagaagattgtg
agagaaatcacctcaactgctcgattatacaaggacgacagaacttgttcccggggacgg
aaaagggatgtacgtagatatgcgatggaacgagtgaatgatgcgtgcgcgaggaatagt
cattgccttctgccctggacatgtgtaatagacactgggccgcatgcacgttggcgactt
tttctaaagaataattggccaaaggattctgggccactcgtctcagagcacaacgaacaa
aatgaaggccggctgtaa
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