Chondrus crispus (carragheen): CHC_T00010185001
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Entry
CHC_T00010185001 CDS
T02916
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31, putative
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
ccp
Chondrus crispus (carragheen)
Pathway
ccp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CHC_T00010185001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccp03041
]
CHC_T00010185001
Spliceosome [BR:
ccp03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
CHC_T00010185001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
17323552
NCBI-ProteinID:
XP_005715839
UniProt:
R7QF41
LinkDB
All DBs
AA seq
496 aa
AA seq
DB search
MTSLAEQFLDDVESSESEDEQLKEEKNGEREVQRKESKSNDDEMAIDAERPAEGILSLEA
RVAFVLKHIEEIRSGLRVPDISTGTSGQNTDDEEYTLVGNCMEIAADIDEEIRSLHGQLV
EAFSPNFPELQTLIFNPLDYARVALLAGNVDDLKKVDLRKILPSGSVIAVQVTAASSARR
ALTQEELNRVKQQCSELISLDESKLKILDYVESRASYMAPNLVEVVGGAVAAKLMGIAGG
LRELAYMPSSNVKVLGKGKKTLQGTSSATTKLHEGVIYTCPLVINLPKQYRSKAGDVLTG
KASLAARVDACREQLDGNVGRKLREKLEEKFLKWQEPPPAKTLKPLPIPGDEAKRKHRGG
KRARREKERLGITDIRRLANRVKFGQQEEVVGNDLENEGFGMLGAEGSKRLRIQSKKTDS
VSIAAKRRLAKQKGRNGISEAAALGITTNLADGIELGAITPAPGGVGLGSMNTNAAKSET
NYFSPSTRFMQVKKEE
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgacctctctggcggagcaattcctagacgacgtagaatcgtccgagagcgaagacgag
caattgaaagaagaaaaaaatggcgaacgtgaagtgcaaagaaaggagtcgaagagcaat
gatgacgaaatggctattgacgcagagcgtccggcagagggaatcttgtcgcttgaagct
cgagtcgcatttgttctgaagcatattgaagaaattcgatcgggtctgcgcgtcccagat
atctccactggcacaagcggccaaaatactgatgatgaagaatacactttggtgggaaac
tgcatggaaattgccgcagacatagacgaagaaattcgttccttacacggccagcttgtg
gaggcgttctccccaaattttccagagctacagacccttattttcaatccccttgactat
gcgcgagtggccttgcttgctggaaatgtggacgacttgaagaaagtggatttgcgaaag
atcttaccatcaggaagtgttatcgctgtacaggtaaccgcagcatcttctgctagaagg
gcactcacgcaagaagagctgaatcgggtgaaacagcagtgcagtgaattgatttcgctc
gacgaatcgaagctaaagattttggactatgtggagagtcgggcgagctacatggcccca
aacctggtggaagtagtgggaggcgctgtcgctgcaaagttaatgggaattgccggcggc
ttgcgcgaattagcgtacatgccgagttccaatgtgaaagtgctcggcaaggggaaaaaa
actttgcaaggcacatcgtccgctaccaccaagctacatgaaggggtgatatatacatgc
cctctcgttataaatcttcccaaacagtacaggtcgaaggcaggagacgtcctaacggga
aaggcctctcttgcggcgagggtcgatgcctgccgcgaacaactagatggaaatgtgggt
cgcaagcttcgggaaaagttggaagaaaaattcctgaagtggcaggagccgccaccagct
aaaacgttaaaacctttaccaatacccggggatgaggcaaagaggaaacaccgcggagga
aaacgagccagacgagaaaaagagcgccttggtatcacggatattcgaaggctagccaat
cgggtcaagtttggccaacaagaggaggtggtggggaatgacttggagaacgaaggcttc
ggaatgctcggtgcggaaggttcaaagcgattgcgaatccagtcgaaaaagacagattca
gtttcgattgcagccaagaggcgattggcgaagcagaaaggtcggaacggaatcagtgaa
gccgcggctttgggaataaccacaaatttagcggacggtattgagctcggcgcgataacc
ccagcccctggtggtgtgggattgggatctatgaatacgaatgcggcgaagagtgaaacc
aactacttctcaccatcaacgcgtttcatgcaggtcaagaaagaagagtaa
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