Chondrus crispus (carragheen): CHC_T00010236001
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Entry
CHC_T00010236001 CDS
T02916
Name
(RefSeq) DEAD box RNA helicase, putative
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
ccp
Chondrus crispus (carragheen)
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccp03009
]
CHC_T00010236001
Enzymes [BR:
ccp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CHC_T00010236001
Ribosome biogenesis [BR:
ccp03009
]
Eukaryotic type
90S particles
Helicases
CHC_T00010236001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
17324660
NCBI-ProteinID:
XP_005716947
UniProt:
R7QHA2
LinkDB
All DBs
AA seq
280 aa
AA seq
DB search
MSAAVTSPTLEAALAHMGTVSPTAAQRRAIPSMRAGNDVVAVAPTGSGKTPAYAVPLLSE
LLSGSRAPNRSAPHALVLAPTRELAEQQARMRACGTLAVERYRTGEVWVLIAIDVLARGL
DFVAVESVVNYDMPISASADVHRIGRTGRNGRKGTAVTLFTREDRVLLGPVLEVAEVSGA
DVPKWALKLKGVRKDVVRRMEKRPPTRKGIGGPNRGSIGKRHKQEKRLESGSRTEEGVAN
RQVTGRKEIQRQGENRRGGRKGVQAMGLNVATGFEEEEYE
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccgctgtgaccagtcctaccttggaagctgctctagctcacatgggtactgtg
tctcccacagccgcgcaacgccgtgcgattccctccatgcgagccggtaacgatgtggtg
gcggtggcgcctacaggttctggtaagacgcctgcttatgccgttcctttactttcagag
ttactgtccgggagtcgggcgccaaatcgttcagccccacatgcgttggtgctagcccca
acacgagagcttgcggagcagcaagcccgcatgcgcgcatgcggcacgcttgccgtagag
cgatatcgaacaggcgaagtgtgggttctgatcgcaatagatgtattggcacgcgggttg
gattttgtagcggtagagagcgtggtgaactacgacatgccgattagcgcatcggcagac
gtgcatagaatcggaagaacagggaggaacgggcgaaaagggacggcagtgacgctgttc
actagggaggatcgagtattgctaggtcctgttctggaagtggcagaggtgagtggagca
gacgtgccaaagtgggcgttgaaactcaaaggcgtgagaaaagatgtggtgaggagaatg
gagaagagaccaccaacgcggaagggaattgggggacctaatcgtggaagcattggaaaa
cgacacaaacaggaaaagaggttggagtcggggagtcggactgaggagggcgtagcgaat
cgacaagtgacgggaagaaaagaaattcagcgacaaggggaaaacagacgaggaggaaga
aaaggggtgcaagcgatgggtctcaatgttgccactggttttgaagaggaagagtatgaa
tga
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