Chondrus crispus (carragheen): CHC_T00010241001
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Entry
CHC_T00010241001 CDS
T02916
Name
(RefSeq) Tuftelin interacting protein 11, predicted
KO
K13103
tuftelin-interacting protein 11
Organism
ccp
Chondrus crispus (carragheen)
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccp03041
]
CHC_T00010241001
Spliceosome [BR:
ccp03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
CHC_T00010241001
Other components
Complex C specific factors
CHC_T00010241001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GCFC
G-patch
Motif
Other DBs
NCBI-GeneID:
17324367
NCBI-ProteinID:
XP_005716661
UniProt:
R7QEA2
LinkDB
All DBs
AA seq
729 aa
AA seq
DB search
MAQFRSVRAPPSVAHVHLADVPPDRGAPFPDTMSSLSPPRRGLGSRPPASPATSSSSSSS
SSAPSLSLSGLPSNFGGSKSRKRRRATPSSPSLPAAPEPPPGEWERHTRGIGSKILAKQG
FSGRLGVHADGIHAPLQSVSRPTRLGLGAGNFDEWKPEEEETKRRDEETEKPRKKKWKKS
AEGVTVRVRKPRLAVGEEKGGKEGHSELPEASKQPLFAVPEIAYNLRLLTDNARSSLDAA
HRRRETEKLIRATTSAEREKLSAESLAAGEAVAYLNELRSRLTTLQRAYDTPNDEFEAAL
DEAARWVGKGAARYIAQQCLTEAIVEVVYSRAEGKVAECLSAGAQSRKGRIREMKHVGRV
LALARGVVMQEMYIALCARLILPRMRRVVMRADWDAVEGAWVADVLRELRDMMPDAVMDA
FAEESLVPRLVRSVEQWKDDDVPLHVWIHPWLPVVGRRGLGEVLGRVRVQVTKRLEKWSS
RDGIERTRELVELVQRWTGVLSRRKLQMALARHVTVKLIRDVEWFCDDVNRLAEVEAGAA
KPECFERMGVWSAVVSARMMGGRLEGMFVGMCRAMRRIVFESGGWREGAEYYRMWKGWLP
RGVVGHVRGGLGAILFVIHAGRVEGREEVRRKLRGADVRGLLKNRFAGAKAEAVKRWKEG
RVGLKEAVMGVAKREGLLVVGDGRAVEGVPTLRVGRVRVVLDGRRGVVGVVTGEGVKVVG
MDELVALAR
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atggctcaatttcgttccgtccgggcccctccctcggtcgcccacgttcacctcgccgac
gtgccgcccgaccgcggcgcccccttcccggacaccatgtcctctctctcccccccacga
cgcggtctgggttcacgcccccccgcctcccctgccacatcctcctcctcctcttcgtcc
tcctcggccccctctctctccttgtctggcctcccctcaaatttcggcggctccaaatcg
cgcaaacgtcgccgcgccacgccgtcttcaccatccctccccgccgctccagagccgccg
cctggagaatgggagcggcatacgcgcggaattggctctaagatcctcgcaaagcaaggg
ttttcaggccgcctcggggtccatgcggatgggatacatgcgccgttgcagtcggtctct
aggccgaccagactgggcctgggggctggtaattttgatgaatggaagcctgaggaagag
gagacgaaaaggagagatgaggagacggagaagccgaggaaaaagaagtggaagaagagt
gcggagggagtcacagtgcgagtacggaagccccggcttgcggtcggggaagagaaaggc
gggaaagaaggacatagcgagctgcctgaggcgagcaagcaacctttgtttgccgtgccg
gaaatcgcctataacctgcgcctgctaaccgacaacgcgcgctcctcccttgacgccgca
catcgccgtcgcgagacagaaaagttgatccgcgctacgacttcagcagagcgcgaaaag
ctgtctgcagagtcccttgccgccggcgaggcggtggcctacctgaacgagctgcgctca
cggctgacgacgctgcagcgcgcgtacgacaccccgaacgacgagtttgaggcagcgtta
gacgaggcagcgcgctgggtgggaaagggggctgctcgatatatagcgcaacagtgtcta
acagaggcgatcgtggaggtggtgtatagtcgggcggagggcaaggttgctgagtgcttg
tcggctggggcgcagagcaggaagggtcgaattcgagagatgaagcacgtaggaagggta
ctagcactagcacggggggtggtgatgcaagagatgtatatagcgctatgtgcgcggctg
atactgccgcggatgcgacgggtggtgatgcgggcggattgggacgcggtggagggggcg
tgggtggcagatgtgctgcgggaactgcgagatatgatgccggatgccgtgatggacgcg
tttgcagaagagagtttggtgccgcggttggttaggagtgtagaacaatggaaggacgac
gacgtaccgctgcacgtgtggatacacccgtggttaccggtggtgggaaggcgcgggttg
ggagaagtgctggggagggtgagggtgcaggtgacgaagcggctggagaagtggagtagc
agagacggaatagagaggaccagagagctggttgagctggtgcaaaggtggactggggtg
ctgtcgagacggaaactgcagatggcgctggcgaggcacgtgacagtgaagttgatacga
gatgtggagtggttttgcgacgacgtgaataggttggctgaagtggaggcaggcgcggcc
aagccagaatgttttgagagaatgggggtttggagtgcggtggttagcgctcggatgatg
gggggacggttggaggggatgtttgtgggaatgtgcagggcgatgagaaggattgtgttt
gagagcggggggtggagggagggggctgagtattacagaatgtggaaggggtggctacca
cggggggtagtggggcatgtgcgaggagggctgggggcgattttgttcgtgatacatgcg
gggcgggtggaggggagggaagaggttcggaggaagctgcgtggcgcggatgtgaggggc
ctgttaaagaataggttcgcgggagcgaaggcggaagcagtgaagcggtggaaggaaggg
cgggtaggcctgaaggaggcggtgatgggggtagcgaagagggaggggttgctggtggta
ggggacgggagggcggtggagggggtgccaacgcttagagtggggagggtgagggtagtg
ctggacgggcggaggggggtggtgggcgttgtgaccggggagggggtgaaggtggtcggg
atggatgagcttgttgcactggcaaggtga
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