KEGG   Chondrus crispus (carragheen): CHC_T00010302001
Entry
CHC_T00010302001  CDS       T02916                                 
Name
(RefSeq) proliferating cellular nuclear antigen, PCNA
  KO
K04802  proliferating cell nuclear antigen
Organism
ccp  Chondrus crispus (carragheen)
Pathway
ccp03030  DNA replication
ccp03410  Base excision repair
ccp03420  Nucleotide excision repair
ccp03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ccp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CHC_T00010302001
   03410 Base excision repair
    CHC_T00010302001
   03420 Nucleotide excision repair
    CHC_T00010302001
   03430 Mismatch repair
    CHC_T00010302001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ccp03032]
    CHC_T00010302001
   03400 DNA repair and recombination proteins [BR:ccp03400]
    CHC_T00010302001
DNA replication proteins [BR:ccp03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    CHC_T00010302001
DNA repair and recombination proteins [BR:ccp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     CHC_T00010302001
   MMR (mismatch excision repair)
    Other MMR factors
     CHC_T00010302001
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    CHC_T00010302001
SSDB
Motif
Pfam: PCNA_N PCNA_C Rad1 YukD DUF2808
Other DBs
NCBI-GeneID: 17322954
NCBI-ProteinID: XP_005715227
UniProt: R7QC97
LinkDB
AA seq 322 aa
PALPFPTSSPTPISSVSVNPTAPPTTLQFLPSSSFFTSSLSTMFEARLPQSATLKKLLDS
VKDLIAQTNFDCSNDGISLQAMDEAHVCLATMTLRSQAFDLYRCDKPLSMGINLTSFSKI
LKCAGNDDSVKIVADDEGADCAEFIFENKSADRVAHFELKLMDIDSEHMSVPDDGDYQAI
INLPSQEYRRIFSDLSIIGDTISIEVSKTSACFSVEGDIGQGSLNIQQSDSADDKSAITI
NVKEPVKMTFPGRYLNMFTKAVPISDSVTLCIQDGHPLAIEFALPEEAGFVRYFLAPKID
QDDDDEDGEAKSDEAIDADEEE
NT seq 969 nt   +upstreamnt  +downstreamnt
cctgccctcccgttccctacctcctccccgaccccgatatcttccgtctccgtgaatcca
actgctcctcccacaaccctccaattccttccttcttcttccttcttcaccagcagcctc
tccacaatgttcgaagcacgtctcccgcaaagcgcaaccctcaaaaagctcctcgactct
gtcaaggatctcatcgctcagactaactttgactgctccaacgatggcatcagccttcag
gcgatggacgaagcccacgtctgcctcgccaccatgaccctgcgctcgcaggccttcgac
ttgtacagatgcgacaagccgctctccatgggcatcaacctcacctccttcagcaagatc
ctcaagtgcgccggcaacgacgactcggtcaaaatcgtcgccgacgacgagggcgccgac
tgcgccgagttcatcttcgaaaacaagagcgccgaccgcgtcgcacatttcgagctcaag
ctcatggacatcgactcggaacacatgagtgtcccggacgatggtgactaccaggccatc
attaacttaccgtcacaggagtatcgccgcatcttttcggatctctctatcattggagac
accatttcaatcgaggtatctaagacatcggcttgcttttcagtggaaggcgatatcggc
cagggctcgcttaatattcagcagagtgattccgctgatgataagagtgctatcaccatc
aatgtcaaggagcccgttaagatgactttcccgggaagatatctcaacatgtttacaaag
gctgtcccgatttccgactctgtcacgctctgtattcaagatggccatcccctcgccatt
gagtttgctctcccagaagaagctgggtttgtccgatacttcctggctcctaagattgat
caagacgacgacgacgaagatggagaagcaaagtctgacgaagcaatcgatgccgatgag
gaagaatag

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