KEGG   Chondrus crispus (carragheen): CHC_T00010331001
Entry
CHC_T00010331001  CDS       T02916                                 
Name
(RefSeq) splicing factor SF1, predicted
  KO
K13095  splicing factor 1
Organism
ccp  Chondrus crispus (carragheen)
Brite
KEGG Orthology (KO) [BR:ccp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ccp03041]
    CHC_T00010331001
Spliceosome [BR:ccp03041]
 Complex A
  Other components
   Complex A specific factors
    CHC_T00010331001
SSDB
Motif
Pfam: SF1-HH KH-I_KHDC4-BBP KH_1
Other DBs
NCBI-GeneID: 17322951
NCBI-ProteinID: XP_005715222
UniProt: R7QC89
LinkDB
AA seq 454 aa
MSAPRERKRPRRSRWEPVDERVKERRELQARLDRITSTIATNAIPVDELCRSPSPEPRYD
ARGKRVNTRYDRALDKLEMERFKLCARLGQLDPTFRPPHGMRALKFSDKLFIPKEKEGTL
NFIGRILGPRGNTQKRLEKDYNCKVAIRGKGSVKDGRARGPSQPEDSEQLHVIITAEGMD
AKDRIAQCKIKIMDILQPRPDDANDHKQAQLRELAQLNGTLRDQDRDFRSPAARGAFDRA
SGRIACAICGESSHPTPDCPKKGPKPPDDANLDADYVAFMAELNGVDPTSPKPPSQPNSD
APTAPHDRRHPTQRPTPPWLLPGAFATRPAPPPPPADLRPAPPGHPPMPHDPYAPPYVHH
PAPPPYANPPPYGAPPYRPVRSPPAYGQGRGAPHQYPPRMYMANDPHAAPPDQRYGADNY
PPPPPPPAIHKGPDLPPPPPPPPARDFPPPPPPG
NT seq 1365 nt   +upstreamnt  +downstreamnt
atgtccgcgccgcgcgagcgcaagcgcccgcggcgctcgcgctgggagcctgtggatgag
cgcgtcaaggagcgccgcgagctgcaggcgcgtctagatcgcatcacgagcacgatcgcc
acgaacgccatcccggtcgacgagctgtgccgctcgccgtcacccgagccgcgctatgac
gcgcgcgggaagcgcgtcaacacccgctacgaccgcgcgctggacaagctggagatggag
cgcttcaagctgtgcgcccgcctgggccagctggacccgaccttccgcccgccgcacggc
atgcgcgccctcaagttttcggacaagctgttcattccgaaggagaaggagggcacgctc
aacttcatcggccgcatcctcggtccgagggggaacacccagaagcgcctggagaaggac
tacaactgcaaggtcgctattcgcggcaagggcagcgtgaaggacggccgcgcgcgcggg
ccgtcgcagccggaggacagcgagcagctgcacgtcatcatcactgcggagggcatggac
gcgaaggaccgtatcgcccaatgcaagatcaagatcatggacatcctgcagccgcgcccg
gacgacgcaaacgaccacaagcaggcccagctgcgcgagctcgcacagctcaacggcacg
ctgcgcgaccaagaccgcgacttccggtcccccgccgcgcgcggcgcctttgatcgcgcc
tccggccgaatcgcctgcgccatctgcggcgagagctcccaccccacgcccgactgcccg
aaaaagggccccaagccgcccgatgacgccaacttggacgcggactacgtcgcatttatg
gcagagctcaacggcgtcgacccaacctcgccgaaaccaccgtcccagccgaactccgac
gctcccaccgcaccacacgaccgccgccacccgacacaacgccccacccctccgtggctt
ctgccaggcgcctttgctacccgcccggccccgccgccgccacctgcagacctccgcccg
gccccgccgggtcatccgccaatgccgcatgacccctatgccccaccgtacgtgcatcat
cccgctccgccaccatatgccaacccgcctccgtacggcgcccctccataccgccctgtg
cgatcgcctccggcttatggacaggggcgtggagcgccgcaccagtacccaccgcgaatg
tacatggcaaacgacccgcacgctgccccgcctgaccagcgctatggtgcagacaactac
cctccgccaccgccgccgccggcaatccacaagggcccggatttgccacccccgccacca
cctccaccggcacgcgactttcccccaccgccaccgccaggataa

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