Chondrus crispus (carragheen): CHC_T00010350001
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Entry
CHC_T00010350001 CDS
T02916
Name
(RefSeq) DEAD (Asp-Glu-Ala-Asp) box polypeptide 21-like, putative
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
ccp
Chondrus crispus (carragheen)
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccp03009
]
CHC_T00010350001
03036 Chromosome and associated proteins [BR:
ccp03036
]
CHC_T00010350001
Enzymes [BR:
ccp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CHC_T00010350001
Ribosome biogenesis [BR:
ccp03009
]
Eukaryotic type
Pre-60S particles
Helicases
CHC_T00010350001
Chromosome and associated proteins [BR:
ccp03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
CHC_T00010350001
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
DD_DDX21-DDX50
ResIII
Cas3-like_C_2
DeaD_dimer
DUF7500
SR-25
POP1_C
CMS1
TRM10_TRM10A
Motif
Other DBs
NCBI-GeneID:
17321338
NCBI-ProteinID:
XP_005713628
UniProt:
R7Q701
LinkDB
All DBs
AA seq
740 aa
AA seq
DB search
MGRGEAGLVIPADDHMGNLLAASASADGPKSDKKKLKKEKKEKKEKKEKKKDKKEKKEKK
KSKRSADQISESRDNSPSPPQKRAKLETSTPVSEKRSGDICMDDDVEDTDIGLGTTIAAK
ADTNAVASFGMSDITVKLLKDKGIESLFDIQAATFKMLRTEKKDVIGRARTGSGKTLAFV
LPIIETIAAESMARVPCQQKPLVLCLAPTRELAQQVHRDFEWIAGGHRLTTACFTGGSAK
GPQKGALRYGLDVLVGTPGRIIDHLDEGNLSLAGVRFVVLDEADEMLSMGFQDAVERILG
ECTTSEMKQTLLFSATVPRWVKDLAKKYMRGDATVTVDMVSSDTNRTNTDITHLAISCPY
TERPDTIADVVKVYTGALGKTIIFTDTKVEANEVSGHEKLINSLGGVGLLHGDIPQGQRE
ATLAAYREGKIRVLVATDVAARGLDIKAVDLVLQTHPPSNYETYIHRSGRTGRAGMTGTC
VTFYGQREKYLIGLIEHKAGMKFKRANPPQATDIIKASVMDTVKTLSSVHEDNLALFREV
AHKVVESYNGEKDAAETALAASLACMAGYTADRFKSRSLLSCFQDCTAAIFCGSQGFESS
GHAWSMLRRVIGGDIAAEMKGMQLCKDRSKAVFDVPERQVKRLVKAAQDLPDGFTVELAM
ETLPELEESPFDLKAAMGSLAEKRFYRGKRGGGGGGWRGGGGGGGGGGGWRGGGGGGGRG
GFRGRGRGGFGGGRGRGGFR
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgggaagaggagaagcagggttagtcatccccgctgacgaccacatgggcaatctgctt
gccgcctccgcctccgcggacgggcccaaatcagacaagaagaagctgaagaaggagaag
aaggaaaagaaagaaaagaaggaaaagaagaaggacaagaaagaaaagaaggaaaagaag
aagagcaagcgctccgcagaccaaatttcagagtcccgcgacaattctccgtccccgcca
cagaaaagggccaagctcgaaacctccacacccgtatcggagaaacgctctggagacatc
tgcatggatgacgatgtcgaagacaccgacatcggtctcggcaccacaatcgccgccaag
gctgataccaatgccgtggcctcgtttggcatgtccgacatcactgtgaagctgctcaag
gacaagggcatcgaatctctcttcgacatccaagccgccaccttcaagatgctacgcacg
gagaagaaggacgtcatcggccgcgcccgcaccggttctggcaagacgctagcctttgtg
ctcccgatcatcgagactatcgcagccgagtccatggcccgcgtcccctgccagcagaag
ccgctcgtgctgtgcttggccccaactcgagagctcgcccagcaggttcaccgcgacttt
gagtggatcgcgggggggcacagactcacgaccgcttgcttcactggcggaagcgcaaag
gggccgcagaagggcgcccttaggtatggcctggatgtgcttgtcggcaccccaggtagg
atcatcgaccatttggatgagggaaacctatctctggcaggtgtccgctttgttgtcctg
gacgaggccgatgagatgctttccatgggctttcaggacgccgtggaaaggattttgggg
gaatgcacgacttcggagatgaagcaaacgttgctgttttcggctaccgtaccgagatgg
gtcaaagatttggctaaaaagtacatgaggggggatgcgacggttactgttgatatggtc
tccagtgataccaacaggacgaatactgatattacacatctggcgatttcttgtccgtac
acagaaaggccagacacgattgcggatgtggtgaaggtgtacacgggggcgctaggaaag
acgattatttttacagacaccaaggtcgaggcgaacgaggtttctgggcatgaaaagttg
atcaactcgctcggaggtgttggattgcttcacggagatattccgcaggggcagagagag
gcgacgcttgcggcgtatcgtgagggcaagatccgagttctggtggcgacggatgtggcg
gctagagggctagatatcaaggcggttgaccttgtgttacagacgcatcccccgtccaat
tatgagacatacattcaccgttctggaagaactgggcgagctggaatgacaggtacttgc
gtgacattttacgggcagagggagaaatatctgattgggctcattgagcacaaggccggg
atgaagttcaagcgtgccaaccctccgcaggcgacggacatcatcaaggcgagtgtaatg
gatacggtgaagacgttgtcgtctgtgcatgaggacaacttggcgctgttccgtgaggtt
gcgcacaaggtggtggagagctacaacggagagaaggatgcagcggagactgcgcttgcc
gcgtcgctggcgtgcatggctgggtatacggcggaccgattcaaatcaagatcattactg
tcgtgctttcaggactgcacggcggctattttctgcggaagtcagggctttgagtcgtct
gggcatgcgtggagcatgctgagacgggtgatcgggggtgatattgcagcagaaatgaag
ggaatgcaactgtgtaaggatcgaagcaaggcagtgtttgacgtgccagaacggcaggta
aaacggttggtaaaagctgcgcaggacttgcctgacgggtttacggtagagctggcgatg
gagacgttgcccgagctggaagaaagcccgtttgatctcaaggcagcgatggggagcttg
gccgagaagagattctaccggggcaagcgtggtggcgggggcggagggtggcgcggcggt
gggggtggaggaggtggtggaggaggatggcgcggcggtgggggtggaggtgggcgtggc
gggttcagaggcaggggacggggtgggtttggagggggaagaggaaggggcggattccgg
tag
DBGET
integrated database retrieval system
