Campylobacter coli 15-537360: N149_0027
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Entry
N149_0027 CDS
T02895
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ccq
Campylobacter coli 15-537360
Pathway
ccq03410
Base excision repair
ccq03430
Mismatch repair
ccq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
N149_0027 (recJ)
03430 Mismatch repair
N149_0027 (recJ)
03440 Homologous recombination
N149_0027 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccq03400
]
N149_0027 (recJ)
DNA repair and recombination proteins [BR:
ccq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
N149_0027 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
N149_0027 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
N149_0027 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Response_reg
Motif
Other DBs
NCBI-ProteinID:
AGZ20524
LinkDB
All DBs
Position
33717..35288
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AA seq
523 aa
AA seq
DB search
MKTIDKNEIRKILASRFEKDLHTKLCDLPLPCCLKDIYKAANRIKEAIDKNEKIAIVGDY
DVDGIISCVIMAEFFDDIGFDYTVRIPNRFKDGYGLNAEIINELDVNLIITVDNGIAAFE
AAKLCKEKNIDLIITDHHMPQDTLPDAFAIINPKQKDCDFPDIEICGAQVAWYLIAALKE
VCKLKYDMGKFLELLAIAIVADMMELRDLNRALVRRGIECINKSKRVAFKAIKQYYQKDK
FALDNIGFLIAPLINSAGRMDDASISYEFLHTKDLDKASAYLEQIISFNESRKDEEKQLF
EDSLSQIDENDSCIVVSGLNWHEGVLGIVASRLAKHFNKPAFVFSQNDQRLKGSARSVGK
IDILALISKANFILSNYGGHKGAAGLSLDLDSFEKFKTIIKKECMEISQSEFLDTDEILG
ILDPNEIDFEMLEILESFEPFGHKNPRPFFILENLYVKNKKFLGKDEKHLKLILTKDNKT
IEALFFNFDKEPQLYENISLLGSISKNEFRGLATPQFIIKEIL
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgaagacgattgataaaaatgaaattagaaaaattctagcttctcgtttcgaaaaagat
ttacataccaaactttgcgatttacctttgccttgctgcttaaaagatatttacaaggcg
gcaaatcgcattaaagaagctatagataaaaatgaaaagatcgctatagtgggtgattat
gatgttgatgggattatctcttgtgttattatggcagaattttttgatgatataggtttt
gattatacagtaagaattcccaaccgctttaaagatggatacggtttaaatgctgaaatt
atcaatgaacttgatgtaaatttgattattacagtggataatggtatagcagcctttgaa
gcagccaagctttgtaaagaaaaaaatattgatttaattataactgatcatcatatgcct
caagatactttacccgatgcctttgcgattatcaatcctaagcaaaaagattgtgatttt
ccagatattgaaatttgcggagcgcaagtggcttggtatttaatagctgctttaaaagag
gtttgtaaattaaaatacgatatgggtaaatttttagaacttctagctattgccattgtt
gcagatatgatggaattaagagatttaaatagagccttggttagacgagggattgagtgt
attaacaaatccaaaagagttgcttttaaggcgattaagcaatattatcaaaaagataaa
tttgcactcgataatataggatttttaatcgctcctcttatcaatagtgctggaagaatg
gatgatgcaagcatttcttatgaatttttacatacaaaggacttggataaagcttcggct
tatttagagcaaatcattagctttaatgaaagccgtaaagatgaggaaaaacagcttttt
gaagatagtttaagtcaaattgatgaaaatgattcttgtattgttgtatcgggtttaaat
tggcatgagggagttttagggatagtagcaagccgtttagcaaaacatttcaataaaccc
gcttttgtattttcacaaaatgatcagcgcttaaaaggaagtgcaagaagtgttggaaaa
attgatattttagctttgatttctaaggcaaatttcatattgagtaattatggcgggcat
aagggtgctgcaggtcttagtttagatcttgattcttttgaaaaatttaaaaccataata
aaaaaagaatgtatggaaatttctcaaagcgaatttttagacacagatgagattttaggt
attttagatcctaatgaaatcgattttgaaatgcttgaaattttagaatctttcgagcct
tttgggcataaaaatccgcgtcctttttttattttggaaaatctttatgttaaaaataaa
aaatttttaggaaaagatgaaaagcatctaaaactcatactcacaaaagataataaaacc
atagaagctttattttttaattttgacaaagaaccccaattgtatgaaaatattagtttg
cttggaagtatttctaagaatgaatttagaggattggcaactccacaatttattattaaa
gaaattttgtaa
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