Campylobacter coli 15-537360: N149_1101
Help
Entry
N149_1101 CDS
T02895
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
ccq
Campylobacter coli 15-537360
Pathway
ccq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
N149_1101 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccq03021
]
N149_1101 (rho)
03019 Messenger RNA biogenesis [BR:
ccq03019
]
N149_1101 (rho)
Transcription machinery [BR:
ccq03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
N149_1101 (rho)
Messenger RNA biogenesis [BR:
ccq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
N149_1101 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
Spore_III_AA
Mor
ATPase_2
AAA
OB_RNB
OB_RNR_1st
AAA_22
ResIII
Motif
Other DBs
NCBI-ProteinID:
AGZ21535
LinkDB
All DBs
Position
complement(624700..625998)
Genome browser
AA seq
432 aa
AA seq
DB search
MEKEKKQHQRTHIPVEGYKIEDLKLLDLENLVKIANECEIENPREFRRQELIFEILKAQT
KKGGFILFTGILEISSEGYGFLRGMDSNLSDSVNDAYVSNSQIRKFALRVGDIVTGQVRE
PKDQEKYYALLKIEAINYLPLQEAKERPLFDNLTPIFPTEKIKLEYDAMKLTGRILDLFT
PIGKGQRGLIVAPPRTGKTELMKELASAIAKNHPEMHLIVLLVDERPEEVTDMQRCVKGE
VFSSTFDLPAYNHVRVAELVIEKAKRMVETGKDVIILLDSITRLARAYNTATPSSGKVLS
GGVDANALHKPKRFFGAARNIENGGSLTIVATALIDTGSRMDDVIFEEFKGTGNSEIVLD
RNISDRRIYPAINIIKSGTRKEELLQGVAELQKIWAIRSAISQMDDIEALKFLYSKMLKT
KDNVELLSIMNE
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaagaaaaaaaacaacatcaaagaacccacattccagtggagggttataaaatt
gaagacttaaaactacttgacttagaaaatctagttaaaatagctaatgaatgcgagata
gaaaatcctagagaatttcgtcgtcaagaactcatttttgaaattttaaaagcccaaacc
aaaaagggtggttttatcctttttacaggaattttagaaatttcttcagaaggttatggc
tttttaaggggtatggattcaaatttaagcgatagtgtcaatgatgcttatgtttcaaac
tcacaaattcgtaaatttgctctacgcgtgggcgatatagtaactggacaagttagagag
cctaaggatcaggaaaaatactatgctcttttgaaaatagaagcgattaattatttgcct
ttgcaagaagctaaagaaagacctttatttgataacttaactcctatttttccaacagaa
aaaatcaaactcgaatacgatgctatgaaattaactggaagaattttagatctttttacc
cctataggtaaaggacaacgcggactcatcgtagcaccgccaagaacgggtaaaacagaa
cttatgaaagagctagcaagtgcgattgctaaaaatcatcctgaaatgcatttaatcgtt
cttttagtcgatgaaagacctgaagaggttactgatatgcaaagatgtgtaaagggtgaa
gtgtttagctctacttttgatttgcctgcttataatcatgttcgcgtggcagaactagtt
atcgaaaaagcaaaaagaatggtagaaacaggcaaagatgttatcattttgctagatagt
atcacaaggcttgctagagcttataacactgcaactccaagcagtggaaaggtactaagt
ggtggggtagatgctaatgcacttcataaacctaaacgcttttttggtgcagcaagaaat
atagaaaatggcggatctttgaccatagtagcaactgcacttatcgacacaggttcaaga
atggatgatgtgatctttgaagaatttaaaggaacgggtaatagcgaaatagtcttagat
agaaatatttcagatagaagaatttatcctgcgattaatatcatcaaatctggaactcga
aaagaagaacttttacaaggagtggcagaactacaaaaaatttgggctattcgttcagcg
atttctcaaatggatgatatcgaagcgcttaaatttctttattcaaaaatgttaaaaact
aaagacaatgtagaacttttatctattatgaatgagtag
DBGET
integrated database retrieval system
