Caulobacter vibrioides CB15: CC_1272
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Entry
CC_1272 CDS
T00049
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ccr
Caulobacter vibrioides CB15
Pathway
ccr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ccr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CC_1272
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccr03021
]
CC_1272
03400 DNA repair and recombination proteins [BR:
ccr03400
]
CC_1272
Enzymes [BR:
ccr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CC_1272
Transcription machinery [BR:
ccr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CC_1272
DNA repair and recombination proteins [BR:
ccr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CC_1272
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
IDH
Motif
Other DBs
NCBI-ProteinID:
AAK23253
UniProt:
Q9A8S9
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All DBs
Position
1418278..1419294
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AA seq
338 aa
AA seq
DB search
MIERNWNELIRPEKPQIETGADATRKARIVAEPLERGFGVTLGNALRRVLLSSLQGAAVT
AIQIDGVVHEFSSLEGVREDVVDIVLNIKQLAVRMHAEGPKRMTLRATGPGPVTAGQIET
PADIEILNPDHVLCTLDDGASVRMEFTVNNGKGYVPADRNRPEDAPIGLIAVDALYSPVK
RVAYRVEPTRQGQSLDYDKLILEVETNGAVTPVDAVAYAARILQDQLQIFITFEEPKAKS
ADESKPELPFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKS
LNEIKEVLAGMGLHLGMDVPNWPPENIEDLAKKFEDQI
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgaaagaaactggaacgagctgatccgtcctgagaagccgcaaatcgaaaccggc
gccgatgcgactcgcaaggcccgtatcgtcgccgaaccgctcgagcgcggcttcggcgtg
acgctcggcaacgctctgcgtcgcgttctcctctcgtcgctgcaaggcgccgccgtcacc
gccatccaaatcgatggcgtggtgcacgaattctcctcgctcgaaggcgtccgtgaagac
gtcgtcgacatcgttctgaatatcaagcaactggccgtgcgcatgcacgccgaaggtccg
aagcgcatgaccctgcgcgccacgggccccggcccggtgaccgctggtcagatcgaaacc
ccggccgacatcgaaatcctgaaccccgaccacgtgctctgcacgctggacgacggcgct
tcggtgcgcatggagttcacggtcaataacggcaagggctacgtcccggccgaccgcaac
cgtccggaagacgcgccgatcggcctcatcgccgtcgacgctctctactcgccggtcaag
cgcgtcgcctaccgcgtcgagccgacccgtcagggtcagtcgctggactacgacaagctg
atcctggaagtggaaaccaacggcgccgtcactccggtggacgccgtggcctacgccgcc
cggatcctgcaggaccaactgcagatcttcatcaccttcgaggaaccgaaggccaagtcg
gccgacgagtccaagccggaactgccgttcaacccggccctgctgaagaaggtcgacgag
ctggaactgtcggtccgttcggccaactgcctgaagaacgacaacatcgtctacatcggc
gacctgatccagaagaccgaagccgagatgctccgcaccccgaacttcggccgcaagtcg
ctgaacgagatcaaggaagtgctcgccggcatgggtctgcacctcggcatggacgtgccg
aactggccgccggagaacatcgaagacctggccaagaagttcgaagaccagatctaa
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