Caulobacter vibrioides CB15: CC_1552
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Entry
CC_1552 CDS
T00049
Name
(GenBank) DNA-directed RNA polymerase, omega subunit
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
ccr
Caulobacter vibrioides CB15
Pathway
ccr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ccr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CC_1552
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccr03021
]
CC_1552
03400 DNA repair and recombination proteins [BR:
ccr03400
]
CC_1552
Enzymes [BR:
ccr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CC_1552
Transcription machinery [BR:
ccr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CC_1552
DNA repair and recombination proteins [BR:
ccr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CC_1552
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
DUF4865
DUF7337
Motif
Other DBs
NCBI-ProteinID:
AAK23531
UniProt:
P58066
LinkDB
All DBs
Position
1715711..1716070
Genome browser
AA seq
119 aa
AA seq
DB search
MARVTVEDCVEKVPNRFALVLLSAHRARGISAGAALMVDRDNDKNPVVALREIADDVIDH
EGLKEHLISTLQRVDEHTEAEEEAETLALLADPSHMQMSELELVRALQSDRDGGQEERY
NT seq
360 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcgtcaccgtcgaagattgcgtcgagaaggttccgaaccgcttcgcgctcgtt
ctgctctcggcccaccgcgctcgcggcatttccgccggcgccgcgctgatggtcgaccgc
gataacgacaagaacccggttgtcgctctgcgcgagatcgccgacgacgtgatcgaccac
gaaggccttaaggaacacctcatcagcacgctgcagcgcgttgacgagcacaccgaggcc
gaggaagaggccgaaaccctggccctgctggccgatcccagccacatgcagatgagcgaa
ctggaactggtccgcgcgctgcaaagcgaccgagacggtggtcaggaggagcggtactga
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