Caulobacter vibrioides CB15: CC_1704
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Entry
CC_1704 CDS
T00049
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
ccr
Caulobacter vibrioides CB15
Brite
KEGG Orthology (KO) [BR:
ccr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccr03016
]
CC_1704
Enzymes [BR:
ccr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
CC_1704
Transfer RNA biogenesis [BR:
ccr03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CC_1704
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
AAK23680
UniProt:
Q9A7L8
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All DBs
Position
1876022..1877191
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AA seq
389 aa
AA seq
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MKLITTTAELAAFCNGLAGEPFVAVDTEFMRETTYWPKLCLIQVASPTQEAVIDPLADNI
DLEPLLVVMRDERILKVFHAARQDVEIFNNLKAMPKPLFDTQVAGMAAGFGEQIAYDALV
RQMLRIEIDKSSRFTDWARRPLTDAQLSYALADVTHLAKLFPILRERLETSGRLAWVEEE
MTAISDPAAYDVDPEKAWRRLRPRKTAPKYLAVFKAVAAWRERTAQNRDQPRGRILKDEA
IDELATQTPGNLEALNNLRGVPKGFGGSKFGPDLLAAIKDALADPEGYAPVVDKPGPPPP
QNAGAVVELLKVLLKARAEEAGVASKLIATVSDLEKIAADDNATTPALTGWRREAFGSDA
LKIKRGELALVLDGARVRVVEVRRAPKND
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgatcaccaccaccgccgagttggcggcgttctgtaatggccttgcgggcgag
cctttcgtcgccgtggacaccgagttcatgcgcgagacgacctactggcccaagctgtgc
ctgatccaggtcgcgtcccccacccaggaagcggtcatcgacccgctcgccgataatatc
gatcttgagccgctgctggtcgtgatgcgtgacgagcgcatcctcaaggtgttccacgcc
gcccggcaggacgtcgagatcttcaacaatctgaaggcgatgcccaagccgctgttcgac
acgcaggtcgcaggcatggccgccggcttcggcgagcagatcgcctatgacgccctggtg
cgtcagatgctgcggatcgagatcgacaagtccagccgcttcaccgactgggcccgacgt
ccgctcaccgacgcgcagctcagctacgccctggccgacgtgacccacctggccaagctg
ttcccgatcctgcgcgagcgcctggaaacctcgggccgtctggcctgggtcgaggaggag
atgaccgccatctccgacccggccgcctatgatgtcgacccggaaaaggcctggcgtcgc
ctgcgtccgcgcaagaccgcgccgaagtatctggccgtgttcaaggccgtcgccgcctgg
cgcgagcgcaccgcccagaaccgcgaccagccgcgcggccggatcctgaaggacgaggcc
atcgacgagctggccacccagacgcccggcaatctcgaggcgctgaacaatctgcgaggc
gtgcccaagggctttggcggcagcaagttcggtcccgacctgctggcggcgatcaaggac
gctctggccgatccggaaggctacgcgcccgtcgtcgacaagcccggcccgccgccgcct
cagaacgccggcgccgtcgtcgagctcctcaaggtgctgctgaaggcgcgtgcggaagag
gccggtgtggcctccaagctgatcgccacggtctccgaccttgagaagatcgccgccgat
gacaacgccacgacgcccgcccttacgggctggcgacgcgaagcgttcggttccgatgcg
ctcaagatcaagcgcggcgaactggcgctggtgctggacggcgcccgtgtgcgggtggtc
gaggtgcgtcgcgcccccaagaacgattga
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