KEGG   Caulobacter vibrioides CB15: CC_2040
Entry
CC_2040           CDS       T00049                                 
Name
(GenBank) ATP-dependent RNA helicase, DEAD/DEAH family
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
ccr  Caulobacter vibrioides CB15
Brite
KEGG Orthology (KO) [BR:ccr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ccr03400]
    CC_2040
Enzymes [BR:ccr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CC_2040
    5.6.2.6  RNA 3'-5' helicase
     CC_2040
DNA repair and recombination proteins [BR:ccr03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    CC_2040
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr DEAD Helicase_C Cas3-like_C_2 ResIII
Other DBs
NCBI-ProteinID: AAK24015
UniProt: Q9A6P4
LinkDB
Position
2245333..2247912
AA seq 859 aa
MLAANALPPQFQAWFAKRGWTPRDHQLAMLDKARAGRGALLIAPTGGGKTLAGFLPSLIE
LAERPPRNTPAGVHTLYISPLKALAVDVERNLLTPIREMGLPIVAESRTGDTGESRKARQ
KVRPPDILLTTPEQLALFCAWEGAREYFSDLRCVIIDEAHAIWPSKRGDLLALGLSRLQQ
FAPNMRRVGLSATVDDPDLVRKWLGVNRVENPPPRAGEVSAEPTEGASTADLQLALSGPP
GHLPRAQGRICEPDIDLVLGAGGAQPVVEVLVSGGRVPWAGHTAEHAMAEVYDIIKAAKT
ALVFVNTRFQAEFAFQRLWELNDEGLPIALHHGSLSAEQRRKVEAAMARGELRAVVCTST
LDMGIDWGDVDLVIQLAAPKGASRMVQRIGRANHRLDEPSRAIFVPASRFEMLECRAAAD
AILENHLDGEPPRTGALDVLAQHIMGCACSEPFKPTDLYDEVRSAGPYAELTWEDFEAVV
DFVSTGGYALRTYDKFRRIVQIADGLRTARNAQARQQHRMNVGAIISPAMINIRIGGGRK
PVGGRKIGEAEEGYFEQLTPGDTFVFAGQVWRYNSLVGADAYVSPAPNDDPKMPSWGGSK
FPLSTYLAERVRQMMHDEREWSALPGDVQEWLSWQKIRSAIPAEGEMLLETFPRGKRFHM
VCYPFDGRLAHTTLAMLLTRRLDRLGVGPLGFVCNDYALNLWSLRPMDDLDLDELFAQDM
LGDDLEAWLDESFMMKRSFKHCALIAGLIERRHPGAEKSGRQVTFSTDLIYDVLRKHQPD
HLMLRCARLDAATGLLDIARLGDMLTRVRGRIRHVALDRVSPFAVPMMLEIGRERAPGDA
AGEMILAEAEADLIAEARP
NT seq 2580 nt   +upstreamnt  +downstreamnt
atgctcgcggcgaacgcccttcctcctcagttccaggcctggttcgccaaacgcgggtgg
accccgcgcgaccatcaactggcgatgctggacaaggcgcgggccggtcgcggggccttg
ctgatcgccccgacgggcggtggcaagaccctggcgggcttcctgcccagcctgatcgaa
ctggccgagcgtcccccgcgcaatacccctgccggcgtccataccctctacatctcgccg
ctgaaggcgctggcagtggacgtcgagcgcaacctgctgacccccattcgcgagatgggc
ctgccgatcgtcgccgagagccgcaccggcgacaccggcgagagccgcaaggcccgccag
aaggtccgcccgcccgacattctgctgaccacgcccgagcaactggcgctgttctgcgcc
tgggagggcgcgcgcgagtatttttccgacctgcgctgcgtgatcatcgatgaggcccat
gcgatctggcccagcaagcgcggcgacctcctggcgctgggtctgtcacgcctgcagcag
ttcgcgcccaacatgcgtcgggtcggattgtcggcgacggtcgatgacccggatctggtg
cgaaagtggctgggcgtgaaccgggtggaaaatcctcccccgcgcgcgggggaggtgtcg
gcggagccgacggagggggccagcacggccgacctccagctcgccctctccggccctccg
ggccacctcccccgcgcgcaggggaggatatgcgaacccgacatcgacctcgtcctgggc
gccggcggcgcgcagccggtcgtcgaggtcctcgtgtccggcggccgcgtaccctgggcc
ggtcacacggccgaacacgcgatggccgaggtctatgacatcatcaaagcggccaaaacg
gcgctggtattcgtcaacacgcgtttccaggccgagttcgccttccagcgactgtgggag
ctgaacgacgagggcctgcccatagcgctgcaccatggcagcctgtcggccgagcaacgg
cgcaaggtcgaggcggcgatggcgcgtggcgaactgcgcgcggtggtctgcacctcgacg
ctcgacatgggcatcgactggggcgacgtggatctcgtcatccagctggccgcgcccaag
ggggcctcgcggatggtgcagcggatcggtcgcgccaaccaccgcctggacgagcccagc
cgcgcgatcttcgtgcccgccagccgcttcgagatgctcgagtgccgcgccgccgccgac
gccatcctggagaaccatctggacggcgaaccgccacgcaccggtgcgctggacgtcctg
gcccagcacatcatgggctgcgcgtgttcggagccgttcaagccgaccgacctctatgac
gaggtccgctcggcggggccttacgccgagctgacctgggaggatttcgaggccgtggtc
gacttcgtctcgaccggcggctatgcgcttcgcacctacgacaagtttcggcggatcgtg
cagatcgccgacggcctcaggaccgcgcgaaacgcccaggcccgccagcagcaccgcatg
aatgtcggcgcgatcatctctccggccatgatcaacatccgcatcggcggaggccgaaag
ccagttggcgggcgcaagatcggcgaggccgaggaaggctatttcgagcagctgacgccc
ggagacaccttcgtcttcgccggtcaggtctggcgatacaacagcctcgtcggggccgac
gcctatgtctcgcccgcgccgaacgacgatcccaagatgcccagctggggcggctcgaag
tttcccttgtcgacctacctcgcagagcgggtccggcagatgatgcatgacgagcgcgag
tggagcgccctgcccggcgacgtgcaggagtggctgtcctggcagaagatccgttcggcc
attccggcggagggcgagatgctgctggagaccttcccgcgcgggaagcggttccacatg
gtctgctatccgttcgacgggcgccttgcccacaccaccctggccatgctgctgacccgc
cgcttggaccgtctgggcgtcggcccgctgggctttgtctgcaacgactacgcgctgaac
ctgtggtcgctgcgccccatggacgatctcgatctcgacgaactgttcgcccaggacatg
ctgggcgacgaccttgaggcttggctggacgagagcttcatgatgaagcggtcgttcaag
cactgcgccctgatcgcgggtctgatcgagcgccgccaccctggcgccgagaagtccggc
cggcaggtgaccttctcgacggacctgatctacgacgtgctgcgcaaacaccaacccgac
cacctgatgctccgctgcgcgcggctcgacgcggccaccggcctgctggacatcgcgcgc
ctgggcgacatgctgacccgcgtcagggggcgcatccggcacgtggcgctggatcgggtc
tcgcccttcgccgtcccgatgatgctggaaatcggccgcgagcgcgcgcccggcgacgcc
gccggtgagatgatcctggccgaggctgaagccgacctgatcgccgaggcgcggccgtga

DBGET integrated database retrieval system