Caulobacter vibrioides CB15: CC_2333
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Entry
CC_2333 CDS
T00049
Name
(GenBank) phage SPO1 DNA polymerase-related protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ccr
Caulobacter vibrioides CB15
Pathway
ccr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ccr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CC_2333
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccr03400
]
CC_2333
Enzymes [BR:
ccr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
CC_2333
DNA repair and recombination proteins [BR:
ccr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CC_2333
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
Motif
Other DBs
NCBI-ProteinID:
AAK24304
UniProt:
Q9A5W4
LinkDB
All DBs
Position
2535784..2537223
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AA seq
479 aa
AA seq
DB search
MQVVRLASEVDFAGWRRAARVLRAEGARPESLVWTVERELFDNDEPVTDAATTFVVPAAF
MEMAQQVVLNRSLDRFALLYRILWRLEREPRLIENPADQDMARARDMAKAVSRAAHKMKA
FVRFRRVEDAAKETYAAWFEPAHRVTEATAPFFARRFSNMNWTILTPDVCVAWNGERLWV
SEGADPADAPSEDAQEALWRTYYASIFNPARLNPRQMRQEMPKRYWRNLPEAALIPGLIE
AAQDRAAAMVTTPPRPPSERVLKAAQRHARDAPYNAGAPTTLDAVRAGVSVCRRCDLWRE
ATQGVPGDGAPSAPLMFVGEQPGDQEDLAGSPLVGPAGQIFDRALAEVSVRREQTYVTNA
VKHFKHELNGKRRLHKTPTQGEVSACRWWLDAERRLVRPTVIVMLGATAAFGVMGRPTPV
RETRGRPLPLPDGVQGLVTFHPSYLLRLPDAAARENAYRSFVDDLRLAGRLAGLAATSP
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtggttcgcctcgcctcagaagtcgatttcgccggctggcgaagggccgcccgg
gtcctgcgggccgagggcgcgcgccccgaatcgctcgtctggacggtggagcgcgagctc
ttcgacaatgatgagccggtgacggacgcggcaacgacgttcgtcgttccagccgccttc
atggaaatggctcaacaggtcgtgctgaaccggtcgctggatcggttcgccctgctctac
cgcattctctggcgactggagcgcgagccgcgattgatcgagaaccccgccgatcaggac
atggcgcgcgcccgcgacatggccaaggccgtcagccgcgccgcccacaagatgaaggcg
ttcgtccgctttcgccgggtggaggacgcagccaaggaaacctacgcggcctggttcgaa
cccgcccaccgggtgaccgaggctacggcgcccttcttcgcgcgccgcttctccaacatg
aactggaccatcctgacacccgacgtctgcgtggcctggaacggggagcggctatgggtt
tcggagggcgcggatcccgccgacgcgccgtccgaagacgcccaggaagcgctctggcga
acctactatgcgtcgatcttcaatccggcccgtctcaacccacgccagatgcgccaggaa
atgcccaagcggtactggcgtaacctcccagaggccgcgctcattccaggccttatcgaa
gccgcccaggatcgcgcggccgccatggtcacgacgccgccgcgtcccccgtcagaacgc
gttctgaaggccgcgcagcgccatgctcgggatgcgccatacaacgctggtgcgccgacc
actctggacgccgtgcgcgccggcgtcagcgtctgtcggcgctgcgatctgtggcgggag
gcgactcagggcgttccgggtgacggggcgcccagcgcgcccttgatgtttgtcggcgag
cagcccggcgatcaggaggatctcgcgggcagccccttggtgggtcctgcaggacagata
ttcgaccgagcgctcgccgaggtgagtgtgcggcgcgagcagacctacgtcacgaacgcg
gtgaagcacttcaagcatgaactcaacgggaaacgccgcctgcacaagacccccacccag
ggcgaggtgagcgcgtgtcgatggtggctggacgcggagcggcggttggtcaggccgacg
gtcatcgtgatgctgggcgcgaccgccgccttcggcgtcatggggcggccaacgcctgtc
cgtgaaaccagaggacgcccactgcccttgccggacggggtccaggggctcgtgaccttt
catccgtcgtacctgctgcgcctgccggacgctgcggcgagagagaacgcctaccgctct
ttcgtggacgatcttcgtctggcgggccggctggccggcctggccgcgacatccccttga
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