Caulobacter vibrioides CB15: CC_2981
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Entry
CC_2981 CDS
T00049
Name
(GenBank) excinuclease ABC, subunit B
KO
K03702
excinuclease ABC subunit B
Organism
ccr
Caulobacter vibrioides CB15
Pathway
ccr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ccr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CC_2981
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccr03400
]
CC_2981
DNA repair and recombination proteins [BR:
ccr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CC_2981
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CC_2981
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
UB2H
AAA_30
Kinesin
AAA_22
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
AAK24943
UniProt:
Q9A462
LinkDB
All DBs
Position
3199545..3201794
Genome browser
AA seq
749 aa
AA seq
DB search
MPSRDTSGVSDVSTPFVLDTVPGGAIPALWTPHRPSRPDKSEGGKKFKLVSDYQPAGDQP
TAIAELVEGLQNGDQDQVLLGVTGSGKTFTMAQVIARTQRPALILAPNKTLAAQLYSEMK
SFFPENAVEYFVSYYDYYQPEAYVPRTDTYIEKDSSINEQIDRMRHSATRAILERDDVIV
VASVSCIYGIGSVETYTAMTFTLEVGQRVDEKQLIADLVAQQYKRNDQAFERGTFRRRGD
TIEIFPAHYEDRAWRVTMFGDEVEALSEFDTLTGKKTADLEMIKVYANSHHVTPRPTLRQ
AIIAIRQELKERLEWLTANGKLLEAQRLEQRTTFDLEMIETTGSCAGIENYSRYLSGRKT
GEPPPTFFEYIPDNALLFTDESHQTVPQIGAMYKGDRNRKWTLAEYGFRLPSALDNRPLK
FEEWDAMRPQSVHVSATPANWELERAGGVFAEQVIRPTGLIDPPVEVRPVSKDGASQVDD
VVDEIRQTIQKGYRTLVTVLTKKMAEDLTEYLTEQGIRVRYMHSDVDTIERIEIIRDLRL
GHFDVLVGINLLREGLDIPECGLVAILDADKEGFLRSETSLIQTIGRAARNVDGKVILYA
DRVTGSMERAMAETARRREKQHAYNLEHGITPESVKRDIKDILNSPYERGDRVLVPMGMS
ETDDRPFSGDNFKAALKDLEAKMREAAANLEFETAARLRDEIKRMKLMDLEFANEVLTAP
GEAVDKAMPKRVRAELRAEQAEAFRKSRL
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgccttctcgcgacacctccggcgtctctgacgtctcgacgcccttcgtgctggacacg
gttccgggcggcgcgatcccggcgctgtggaccccgcaccgcccctcgcgtcccgacaag
tccgagggcggcaagaaattcaagctggtcagcgactaccagcccgccggcgaccagccg
accgccatcgccgagctggtcgagggcctgcagaacggcgaccaggaccaggtgctgctc
ggcgtcaccggctcgggcaagaccttcaccatggcccaggtcatcgcgcgcacccagcgc
ccggccctgatcctggcccccaacaagaccctggccgcccagctctacagcgagatgaag
tcgttcttcccggagaacgcggtcgagtacttcgtcagctactacgactactaccagccg
gaagcctatgtgccccggaccgacacctatatcgagaaggactcctcgattaacgagcag
atcgaccggatgcgccactcggccacccgggcgatcctggagcgcgacgacgtcatcgtc
gtggcctcggtgtcgtgcatctacggtatcggctcggtcgagacctacaccgccatgacc
ttcaccctggaggtcgggcaaagggtcgacgaaaagcagctgatcgccgacctagtggcc
cagcagtacaagcgcaacgaccaggccttcgagcgcggcacgttccggcgccggggcgac
accatcgagatcttccccgcccactacgaggaccgcgcctggcgcgtcacgatgttcggc
gacgaggtcgaggcgctcagcgagttcgacaccctgaccggcaagaagacggccgacctt
gagatgatcaaggtctacgccaacagccaccacgtcaccccgcgccccaccctgcgccag
gcgatcatcgccatccgccaggagctgaaagagcggctggaatggctgaccgccaacggc
aagctgctggaggcccagcggctggagcagcgcacgacctttgacctggagatgatcgag
accaccggctcgtgcgccggcatcgagaactacagccgctatctgtcgggccgtaagacc
ggcgagccgccgccgaccttcttcgaatacatccccgacaacgccctcctgttcaccgac
gagagccaccagacggttccgcagatcggcgccatgtacaagggcgaccgcaaccgcaaa
tggaccctcgccgagtacggcttccgcctgccctcggccctggacaaccgccccctcaag
ttcgaggagtgggacgccatgcggccccagtcggtgcacgtttccgccaccccggccaac
tgggagctggagcgggccggcggcgtcttcgccgagcaggtcatccgccccaccggcctg
atcgacccgccggtcgaggtgcgccccgtgtccaaggacggcgccagccaggtcgatgac
gtggtcgacgagatccgccagaccatccagaagggctaccgcaccctggtcacggtcctg
acgaaaaagatggccgaggacctgaccgaatacctgaccgaacagggcatccgcgtccgc
tacatgcacagcgacgtcgacaccatcgagcgcatcgagatcatccgcgacctgcgtctg
ggccacttcgacgtgctggtgggcatcaacctgctgcgcgagggcctggacatccccgaa
tgcggcctcgtggccattctcgacgccgacaaggaaggcttcctgcgctcggagaccagc
ctgatccagaccatcggccgcgccgcgcgcaacgtggacggcaaggtcatcctctatgcc
gaccgggtcaccggcagcatggagcgggccatggccgagaccgcccgccgccgcgagaag
cagcacgcctacaacctcgaacacggcatcacgcccgagagcgtcaagcgcgacatcaag
gacatcctcaacagcccctacgagcgcggcgaccgcgtgctggtgcccatgggcatgtcc
gaaaccgacgaccgcccgttcagcggcgacaacttcaaggccgcgctcaaggacctggag
gccaagatgcgcgaggccgccgccaacctggaattcgaaaccgccgcccgcctgcgcgac
gagatcaagcgcatgaagctgatggacctggaattcgccaacgaggtcctcaccgcccca
ggcgaggcggtggacaaggccatgcccaaacgcgtgcgcgccgagctgcgggccgagcag
gccgaggcgttccggaagagccggctgtaa
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