KEGG   Caulobacter vibrioides CB15: CC_2981
Entry
CC_2981           CDS       T00049                                 
Name
(GenBank) excinuclease ABC, subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
ccr  Caulobacter vibrioides CB15
Pathway
ccr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ccr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    CC_2981
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ccr03400]
    CC_2981
DNA repair and recombination proteins [BR:ccr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CC_2981
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      CC_2981
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd UvrB Helicase_C ResIII UVR DEAD UB2H AAA_30 Kinesin AAA_22 Microtub_bd
Other DBs
NCBI-ProteinID: AAK24943
UniProt: Q9A462
LinkDB
Position
3199545..3201794
AA seq 749 aa
MPSRDTSGVSDVSTPFVLDTVPGGAIPALWTPHRPSRPDKSEGGKKFKLVSDYQPAGDQP
TAIAELVEGLQNGDQDQVLLGVTGSGKTFTMAQVIARTQRPALILAPNKTLAAQLYSEMK
SFFPENAVEYFVSYYDYYQPEAYVPRTDTYIEKDSSINEQIDRMRHSATRAILERDDVIV
VASVSCIYGIGSVETYTAMTFTLEVGQRVDEKQLIADLVAQQYKRNDQAFERGTFRRRGD
TIEIFPAHYEDRAWRVTMFGDEVEALSEFDTLTGKKTADLEMIKVYANSHHVTPRPTLRQ
AIIAIRQELKERLEWLTANGKLLEAQRLEQRTTFDLEMIETTGSCAGIENYSRYLSGRKT
GEPPPTFFEYIPDNALLFTDESHQTVPQIGAMYKGDRNRKWTLAEYGFRLPSALDNRPLK
FEEWDAMRPQSVHVSATPANWELERAGGVFAEQVIRPTGLIDPPVEVRPVSKDGASQVDD
VVDEIRQTIQKGYRTLVTVLTKKMAEDLTEYLTEQGIRVRYMHSDVDTIERIEIIRDLRL
GHFDVLVGINLLREGLDIPECGLVAILDADKEGFLRSETSLIQTIGRAARNVDGKVILYA
DRVTGSMERAMAETARRREKQHAYNLEHGITPESVKRDIKDILNSPYERGDRVLVPMGMS
ETDDRPFSGDNFKAALKDLEAKMREAAANLEFETAARLRDEIKRMKLMDLEFANEVLTAP
GEAVDKAMPKRVRAELRAEQAEAFRKSRL
NT seq 2250 nt   +upstreamnt  +downstreamnt
atgccttctcgcgacacctccggcgtctctgacgtctcgacgcccttcgtgctggacacg
gttccgggcggcgcgatcccggcgctgtggaccccgcaccgcccctcgcgtcccgacaag
tccgagggcggcaagaaattcaagctggtcagcgactaccagcccgccggcgaccagccg
accgccatcgccgagctggtcgagggcctgcagaacggcgaccaggaccaggtgctgctc
ggcgtcaccggctcgggcaagaccttcaccatggcccaggtcatcgcgcgcacccagcgc
ccggccctgatcctggcccccaacaagaccctggccgcccagctctacagcgagatgaag
tcgttcttcccggagaacgcggtcgagtacttcgtcagctactacgactactaccagccg
gaagcctatgtgccccggaccgacacctatatcgagaaggactcctcgattaacgagcag
atcgaccggatgcgccactcggccacccgggcgatcctggagcgcgacgacgtcatcgtc
gtggcctcggtgtcgtgcatctacggtatcggctcggtcgagacctacaccgccatgacc
ttcaccctggaggtcgggcaaagggtcgacgaaaagcagctgatcgccgacctagtggcc
cagcagtacaagcgcaacgaccaggccttcgagcgcggcacgttccggcgccggggcgac
accatcgagatcttccccgcccactacgaggaccgcgcctggcgcgtcacgatgttcggc
gacgaggtcgaggcgctcagcgagttcgacaccctgaccggcaagaagacggccgacctt
gagatgatcaaggtctacgccaacagccaccacgtcaccccgcgccccaccctgcgccag
gcgatcatcgccatccgccaggagctgaaagagcggctggaatggctgaccgccaacggc
aagctgctggaggcccagcggctggagcagcgcacgacctttgacctggagatgatcgag
accaccggctcgtgcgccggcatcgagaactacagccgctatctgtcgggccgtaagacc
ggcgagccgccgccgaccttcttcgaatacatccccgacaacgccctcctgttcaccgac
gagagccaccagacggttccgcagatcggcgccatgtacaagggcgaccgcaaccgcaaa
tggaccctcgccgagtacggcttccgcctgccctcggccctggacaaccgccccctcaag
ttcgaggagtgggacgccatgcggccccagtcggtgcacgtttccgccaccccggccaac
tgggagctggagcgggccggcggcgtcttcgccgagcaggtcatccgccccaccggcctg
atcgacccgccggtcgaggtgcgccccgtgtccaaggacggcgccagccaggtcgatgac
gtggtcgacgagatccgccagaccatccagaagggctaccgcaccctggtcacggtcctg
acgaaaaagatggccgaggacctgaccgaatacctgaccgaacagggcatccgcgtccgc
tacatgcacagcgacgtcgacaccatcgagcgcatcgagatcatccgcgacctgcgtctg
ggccacttcgacgtgctggtgggcatcaacctgctgcgcgagggcctggacatccccgaa
tgcggcctcgtggccattctcgacgccgacaaggaaggcttcctgcgctcggagaccagc
ctgatccagaccatcggccgcgccgcgcgcaacgtggacggcaaggtcatcctctatgcc
gaccgggtcaccggcagcatggagcgggccatggccgagaccgcccgccgccgcgagaag
cagcacgcctacaacctcgaacacggcatcacgcccgagagcgtcaagcgcgacatcaag
gacatcctcaacagcccctacgagcgcggcgaccgcgtgctggtgcccatgggcatgtcc
gaaaccgacgaccgcccgttcagcggcgacaacttcaaggccgcgctcaaggacctggag
gccaagatgcgcgaggccgccgccaacctggaattcgaaaccgccgcccgcctgcgcgac
gagatcaagcgcatgaagctgatggacctggaattcgccaacgaggtcctcaccgcccca
ggcgaggcggtggacaaggccatgcccaaacgcgtgcgcgccgagctgcgggccgagcag
gccgaggcgttccggaagagccggctgtaa

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